EnhancerDB
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  3. rs949734[chr12:53373962]
Enhancers that have rs949734[chr12:53373962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs949734[chr12:53373962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53373510 53374485 ZBTB33 GTRD no Lung (A549) 21548863
chr12 53373543 53374171 ZNF143 GTRD no Epithelial (MCF-7) 21548864
chr12 53373546 53374490 ZNF274 GTRD no Cervix (HeLa-S3) 21548865
chr12 53373551 53373970 ZNF143 GTRD no Epithelial (MCF-7) 21548866
chr12 53373684 53374275 ZNF274 GTRD no Bone Marrow (K562) 21548869
chr12 53373691 53374095 ZNF274 GTRD no Liver (HepG2) 21548870
chr12 53373693 53374028 ZNF274 GTRD no Bone Marrow (K562) 21548871
chr12 53373694 53374209 ZNF274 GTRD no Liver (HepG2) 21548872
chr12 53373697 53374037 ZNF274 GTRD no Liver (HepG2) 21548873
chr12 53373697 53374051 ZNF274 GTRD no Liver (HepG2) 21548874
chr12 53373705 53374166 ZNF274 GTRD no Liver (HepG2) 21548875
chr12 53373734 53373986 ZNF274 GTRD no Liver (HepG2) 21548876
chr12 53373952 53373969 RARA JASPAR yes 120969783
chr12 53373952 53373969 RXRA JASPAR yes 120969784
chr12 53373955 53373965 GABPA JASPAR yes 120969785
chr12 53373957 53373963 ETS1 JASPAR yes 120969786
chr12 53373957 53373963 SPI1 JASPAR yes 120969787
Genes associated with rs949734[chr12:53373962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More