EnhancerDB
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  3. rs949939[chr17:53663115]
Enhancers that have rs949939[chr17:53663115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs949939[chr17:53663115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53662162 53663396 ZNF274 GTRD no Bone Marrow (K562) 21772821
chr17 53662350 53663243 ZNF274 GTRD no Bone Marrow (K562) 21772824
chr17 53662435 53663125 ZNF274 GTRD no Bone Marrow (K562) 21772825
chr17 53662438 53663225 ZNF274 GTRD no Bone Marrow (K562) 21772827
chr17 53662547 53663176 ZNF274 GTRD no Bone Marrow (K562) 21772834
chr17 53662583 53663136 ZNF274 GTRD no Bone Marrow (K562) 21772835
chr17 53663019 53663379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772848
chr17 53663100 53663290 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772849
chr17 53663103 53663117 SPIC JASPAR yes 54862626
chr17 53663108 53663123 AR JASPAR yes 54862627
Genes associated with rs949939[chr17:53663115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More