EnhancerDB
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Enhancers that have rs9676789[chr19:4973852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9676789[chr19:4973852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4973834 4973855 IRF1 JASPAR yes 112200789
chr19 4973835 4973856 IRF1 JASPAR yes 112200791
chr19 4973836 4973857 IRF1 JASPAR yes 112200793
chr19 4973837 4973852 FOXP1 JASPAR yes 112200794
chr19 4973837 4973858 IRF1 JASPAR yes 112200795
chr19 4973838 4973853 FOXP1 JASPAR yes 112200796
chr19 4973838 4973859 IRF1 JASPAR yes 112200797
chr19 4973839 4973854 FOXP1 JASPAR yes 112200798
chr19 4973840 4973855 FOXP1 JASPAR yes 112200799
chr19 4973841 4973856 FOXP1 JASPAR yes 112200800
chr19 4973841 4973862 IRF1 JASPAR yes 112200801
chr19 4973842 4973857 FOXP1 JASPAR yes 112200802
chr19 4973845 4973859 STAT1 JASPAR yes 112200803
chr19 4973845 4973860 STAT2 JASPAR yes 112200804
Genes associated with rs9676789[chr19:4973852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More