EnhancerDB
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  3. rs974878[chr1:175196177]
Enhancers that have rs974878[chr1:175196177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175184751 175208860 enh747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Heart
Transcript factors that have rs974878[chr1:175196177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175195483 175196519 P63 GTRD no Skin (Keratinocyte) 21351941
chr1 175195511 175196445 P63 GTRD no Skin (Keratinocyte) 21351942
chr1 175195532 175196400 P63 GTRD no Skin (Keratinocyte) 21351943
chr1 175195571 175196485 P63 GTRD no Skin (Keratinocyte) 21351944
chr1 175195738 175198129 AR GTRD no Prostate (PC-3) 21351945
chr1 175196169 175196180 TBX2 JASPAR yes 33275709
chr1 175196170 175196178 TBX15 JASPAR yes 33275710
chr1 175196170 175196178 TBX1 JASPAR yes 33275711
chr1 175196170 175196178 TBX4 JASPAR yes 33275712
chr1 175196170 175196178 TBX5 JASPAR yes 33275713
chr1 175196170 175196183 SMAD2 JASPAR yes 33275714
chr1 175196170 175196185 NR2C2 JASPAR yes 33275715
Genes associated with rs974878[chr1:175196177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More