EnhancerDB
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  3. rs983514[chr1:172872452]
Enhancers that have rs983514[chr1:172872452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs983514[chr1:172872452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172870697 172872476 TCF7L2 GTRD no Colon (HCT116) 21350399
chr1 172872447 172872457 RORA JASPAR yes 33163659
chr1 172872448 172872459 ESRRA JASPAR yes 33163660
chr1 172872448 172872459 ESRRB JASPAR yes 33163661
chr1 172872448 172872461 NR2F1 JASPAR yes 33163662
chr1 172872449 172872467 ESR2 JASPAR yes 33163663
chr1 172872452 172872456 ESR1 TRANSFAC yes 33163664
Genes associated with rs983514[chr1:172872452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More