EnhancerDB
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  3. rs9885932[chr6:12054830]
Enhancers that have rs9885932[chr6:12054830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12042640 12055275 enh8953
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs9885932[chr6:12054830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12054825 12054836 HOXA10 JASPAR yes 99941317
chr6 12054825 12054836 HOXC11 JASPAR yes 99941318
chr6 12054826 12054834 NKX6-1 JASPAR yes 99941319
chr6 12054826 12054836 HOXC10 JASPAR yes 99941320
chr6 12054826 12054836 HOXD11 JASPAR yes 99941321
chr6 12054828 12054832 YY1 TRANSFAC yes 99941322
Genes associated with rs9885932[chr6:12054830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More