EnhancerDB
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  3. rs9897952[chr17:57497834]
Enhancers that have rs9897952[chr17:57497834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
Transcript factors that have rs9897952[chr17:57497834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57497001 57498012 ZNF143 GTRD no Epithelial (MCF-7) 21774939
chr17 57497646 57497889 ZNF143 GTRD no Epithelial (MCF-7) 21774942
chr17 57497685 57497921 ZNF143 GTRD no Epithelial (MCF-7) 21774943
chr17 57497826 57497844 E2F3 JASPAR yes 55057901
chr17 57497831 57497836 SP1 TRANSFAC yes 55057902
Genes associated with rs9897952[chr17:57497834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 57936851 57970304 - TUBD1 ENSG00000108423.10 57970304 439017 Pancreas 0.12144 16107