EnhancerDB
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Enhancers that have rs9899752[chr17:53526458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9899752[chr17:53526458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53526004 53526574 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772675
chr17 53526030 53526500 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772676
chr17 53526043 53526547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772677
chr17 53526071 53526547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772680
chr17 53526075 53526459 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772681
chr17 53526125 53526469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772683
chr17 53526451 53526465 TCF7L2 JASPAR yes 54852430
chr17 53526455 53526461 TCF1 TRANSFAC yes 54852432
Genes associated with rs9899752[chr17:53526458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More