EnhancerDB
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  3. rs9904270[chr17:38479831]
Enhancers that have rs9904270[chr17:38479831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38477236 38480096 vista24701
VISTA
Transcript factors that have rs9904270[chr17:38479831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38479453 38479889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753722
chr17 38479453 38479889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254590
chr17 38479470 38479870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753723
chr17 38479470 38479870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254592
chr17 38479525 38479961 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753724
chr17 38479525 38479961 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254596
chr17 38479818 38479831 SMAD2 JASPAR yes 21233931
chr17 38479818 38479831 SMAD2 JASPAR yes 54205412
Genes associated with rs9904270[chr17:38479831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More