EnhancerDB
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  3. rs9904427[chr17:53654887]
Enhancers that have rs9904427[chr17:53654887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs9904427[chr17:53654887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53654281 53654936 ZNF143 GTRD no Epithelial (MCF-7) 108273091
chr17 53654400 53654926 ZNF143 GTRD no Epithelial (MCF-7) 108273098
chr17 53654420 53655010 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772789
chr17 53654420 53655010 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273101
chr17 53654886 53654890 YY1 TRANSFAC yes 54861144
Genes associated with rs9904427[chr17:53654887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More