EnhancerDB
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  3. rs9906253[chr17:79017259]
Enhancers that have rs9906253[chr17:79017259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs9906253[chr17:79017259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79017158 79018217 ZNF143 GTRD no Epithelial (MCF-7) 21797529
chr17 79017158 79018217 ZNF143 GTRD no Epithelial (MCF-7) 108308354
chr17 79017248 79018006 ZNF143 GTRD no Epithelial (MCF-7) 21797530
chr17 79017248 79018006 ZNF143 GTRD no Epithelial (MCF-7) 108308355
chr17 79017255 79017273 ESR1 JASPAR yes 56300396
Genes associated with rs9906253[chr17:79017259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More