EnhancerDB
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  3. rs9933597[chr16:88282946]
Enhancers that have rs9933597[chr16:88282946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs9933597[chr16:88282946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88281476 88283271 ZNF274 GTRD no Cervix (HeLa-S3) 21735638
chr16 88281713 88283270 ZNF274 GTRD no Cervix (HeLa-S3) 21735642
chr16 88281803 88283101 ZNF274 GTRD no Cervix (HeLa-S3) 21735645
chr16 88281812 88283000 ZNF274 GTRD no Cervix (HeLa-S3) 21735647
chr16 88281947 88283092 TCF7L2 GTRD no Colon (HCT116) 21735648
chr16 88282073 88283234 ZNF143 GTRD no Epithelial (MCF-7) 21735654
chr16 88282143 88283343 ZNF143 GTRD no Epithelial (MCF-7) 21735657
chr16 88282175 88283062 ZBTB33 GTRD no Brain (SK-N-SH) 21735659
chr16 88282422 88283030 MYOD GTRD no Muscle (Myoblast) 21735662
chr16 88282472 88283061 ZNF274 GTRD no Cervix (HeLa-S3) 21735663
chr16 88282579 88282968 ZBTB33 GTRD no Brain (SK-N-SH) 21735664
chr16 88282942 88282956 PLAG1 JASPAR yes 12271075
Genes associated with rs9933597[chr16:88282946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More