EnhancerDB
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  3. rs9940283[chr16:4998407]
Enhancers that have rs9940283[chr16:4998407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs9940283[chr16:4998407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4998400 4998411 CDX2 JASPAR yes 9293957
chr16 4998401 4998412 HOXA10 JASPAR yes 9293958
chr16 4998402 4998411 CDX1 JASPAR yes 9293962
chr16 4998402 4998412 HOXA13 JASPAR yes 9293963
chr16 4998402 4998412 HOXB13 JASPAR yes 9293964
chr16 4998402 4998412 HOXD13 JASPAR yes 9293965
Genes associated with rs9940283[chr16:4998407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More