EnhancerDB
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  3. rs9950540[chr18:57625775]
Enhancers that have rs9950540[chr18:57625775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs9950540[chr18:57625775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57625280 57625870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825635
chr18 57625770 57625784 SPIC JASPAR yes 111068511
chr18 57625772 57625776 NFE TRANSFAC yes 111068512
chr18 57625772 57625777 GATA1 TRANSFAC yes 111068513
chr18 57625772 57625778 GATA3 JASPAR yes 111068514
Genes associated with rs9950540[chr18:57625775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More