EnhancerDB
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Chromosome characteristics of SOX2[chr17:54864000-54864474]
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Enhancers possibly regulated by SOX2[chr17:54864000-54864474]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
chr17 54864431 54864801 vista25208
VISTA
SNP sites on SOX2[chr17:54864000-54864474]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr17 54864001 rs79212465 G A,T 4945147
chr17 54864008 rs8068383 C G 4945148
chr17 54864056 rs548998029 G A 4945149
chr17 54864086 rs577136667 CAT C 4945150
chr17 54864198 rs550350003 A G 4945151
chr17 54864221 rs73323038 C A 4945152
chr17 54864245 rs8068579 A G 4945153
chr17 54864252 rs370278911 G GT 4945154
chr17 54864252 rs8069006 G A 4945155
chr17 54864259 rs535658452 T G 4945156
chr17 54864263 rs545658697 C T 4945157
chr17 54864268 rs185239922 C T 4945158
chr17 54864285 rs575922003 G A 4945159
chr17 54864424 rs189952651 A G 4945160
Genes possibly regulated by SOX2[chr17:54864000-54864474]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of Genes
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No results
miRNAs possibly regulated by SOX2[chr17:54864000-54864474]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results