EnhancerDB
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Enhancers that regulate SCYL3[ENSG00000000457.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 169783905 169788055 enh108380 169863408 75353
Lung (PC-9)
chr1 169834996 169835276 vista3833 169863408 28132
VISTA
chr1 169852445 169856595 enh108381 169863408 6813
Lung (PC-9)
chr1 169860308 169860488 vista3834 169863408 2920
VISTA
chr1 169872065 169887325 enh79248 169863408 8657
Prostate (PC-3) Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Peripheral Blood (MM.1S)
chr1 169884881 169885211 vista3835 169863408 21473
VISTA
chr1 169886878 169886942 vista3836 169863408 23470
VISTA
chr1 169892785 169897575 enh79249 169863408 29377
Prostate (PC-3) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
chr1 169901665 169905815 enh95915 169863408 38257
Epithelial (MCF-7)
chr1 169909465 169913955 enh79250 169863408 46057
Prostate (PC-3) Uterus Epithelial (MCF-7)
chr1 169910396 169913079 vista121 169863408 46988
VISTA
chr1 169911234 169911623 vista3837 169863408 47826
VISTA
Transcript facotrs that regulate SCYL3[ENSG00000000457.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 169860058 169860797 ZNF274 GTRD no Blood (GM12878) 169863408 2611 107845020
chr1 169860113 169860709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2699 107845021
chr1 169860186 169860614 ZNF274 GTRD no Blood (GM12878) 169863408 2794 107845022
chr1 169860217 169860671 ZNF274 GTRD no Blood (GM12878) 169863408 2737 107845023
chr1 169860233 169860617 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2791 107845024
chr1 169860234 169860510 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2898 107845025
chr1 169860273 169860465 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2943 107845026
chr1 169860278 169860658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2750 107845027
chr1 169860283 169860672 ZNF274 GTRD no Blood (GM12878) 169863408 2736 107845028
chr1 169860329 169860574 ZNF274 GTRD no Blood (GM12878) 169863408 2834 107845029
chr1 169860338 169860353 RUNX2 JASPAR yes 169863408 3055 118396426
chr1 169860340 169860669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 169863408 2739 107845030
chr1 169860346 169860357 USF2 JASPAR yes 169863408 3051 118396427
chr1 169860361 169860376 HSF1 JASPAR yes 169863408 3032 118396428
chr1 169860371 169860378 SPIB JASPAR yes 169863408 3030 118396429
chr1 169860371 169860382 FLI1 JASPAR yes 169863408 3026 118396430
chr1 169860372 169860380 EHF JASPAR yes 169863408 3028 118396431
chr1 169860373 169860380 SPI1 JASPAR yes 169863408 3028 118396432
chr1 169860380 169860385 MYC TRANSFAC yes 169863408 3023 118396433
chr1 169860385 169860396 HOXA10 JASPAR yes 169863408 3012 118396434
chr1 169860385 169860396 HOXC11 JASPAR yes 169863408 3012 118396435
chr1 169860385 169860396 HOXC12 JASPAR yes 169863408 3012 118396436
chr1 169860385 169860881 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 169863408 2527 107845031
chr1 169860386 169860396 HOXC10 JASPAR yes 169863408 3012 118396437
chr1 169860386 169860396 HOXD11 JASPAR yes 169863408 3012 118396438
chr1 169860395 169860965 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 169863408 2443 107845032
chr1 169860399 169860414 FOXP1 JASPAR yes 169863408 2994 118396439
chr1 169860400 169860411 FOXA1 JASPAR yes 169863408 2997 118396440
chr1 169860400 169860415 FOXA1 JASPAR yes 169863408 2993 118396441
chr1 169860401 169860413 FOXC2 JASPAR yes 169863408 2995 118396442
chr1 169860421 169860432 NFE2L2 JASPAR yes 169863408 2976 118396443
chr1 169860422 169860433 FOS JASPAR yes 169863408 2975 118396444
chr1 169860423 169860434 JUNB JASPAR yes 169863408 2974 118396445
chr1 169860423 169860437 JUN JASPAR yes 169863408 2971 118396446
chr1 169860424 169860435 BATF JASPAR yes 169863408 2973 118396447
chr1 169860430 169860437 NKX3-1 JASPAR yes 169863408 2971 118396448
chr1 169860439 169860443 LFA1 TRANSFAC yes 169863408 2965 118396449
chr1 169860444 169860448 YY1 TRANSFAC yes 169863408 2960 118396450
chr1 169860452 169860456 NFE TRANSFAC yes 169863408 2952 118396451
chr1 169860453 169860458 GATA2 JASPAR yes 169863408 2950 118396452
chr1 169860467 169860477 ELK1 JASPAR yes 169863408 2931 118396453
chr1 169860468 169860479 ETV2 JASPAR yes 169863408 2929 118396454
chr1 169860469 169860478 ELK4 JASPAR yes 169863408 2930 118396455
chr1 169860469 169860479 ELK1 JASPAR yes 169863408 2929 118396456
chr1 169860469 169860479 ELK3 JASPAR yes 169863408 2929 118396457
chr1 169860469 169860479 ERF JASPAR yes 169863408 2929 118396458
chr1 169860469 169860479 ERG JASPAR yes 169863408 2929 118396459
chr1 169860469 169860479 ETS1 JASPAR yes 169863408 2929 118396460
chr1 169860469 169860479 ETV1 JASPAR yes 169863408 2929 118396461
chr1 169860469 169860479 ETV3 JASPAR yes 169863408 2929 118396462
chr1 169860469 169860479 ETV4 JASPAR yes 169863408 2929 118396463
chr1 169860469 169860479 ETV5 JASPAR yes 169863408 2929 118396464
chr1 169860469 169860479 FEV JASPAR yes 169863408 2929 118396465
chr1 169860469 169860479 FLI1 JASPAR yes 169863408 2929 118396466
chr1 169860469 169860479 GABPA JASPAR yes 169863408 2929 118396467
chr1 169860469 169860480 ELK4 JASPAR yes 169863408 2928 118396468
chr1 169860471 169860477 ETS1 JASPAR yes 169863408 2931 118396469
chr1 169860471 169860477 SPI1 JASPAR yes 169863408 2931 118396470
chr1 169860478 169861376 ZNF274 GTRD no Liver (HepG2) 169863408 2032 107845033
SNPs associated with SCYL3[ENSG00000000457.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 168941890 rs10919026 C T 876882 Esophagus 0.181441 713850
chr1 169860473 rs3753311 G A 0 Esophagus 0.0361568 718004
chr1 170779142 rs75568312 C T 915734 Lung 0.103435 721500
chr1 170065845 rs114158223 C A 202437 Adrenal 0.386457 718805
Details of SCYL3[ENSG00000000457.9]
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Genomic Location chr1:169818772-169863408[-]
TSS 169863408
Gene Name SCYL3
Ensembl ID ENSG00000000457.9
ENTREZID 57147
Uniprot
Q8IZE3
Protein Name
Protein-associating with the carboxyl-terminal domain of ezrin
Expression levels of SCYL3[ENSG00000000457.9]
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