EnhancerDB
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Enhancers that regulate CCDC109B[ENSG00000005059.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 110398145 110402295 enh113642 110481361 79066
Brain (SK-N-MC)
chr4 110449545 110449722 vista45623 110481361 31639
VISTA
chr4 110464231 110464470 vista45624 110481361 16891
VISTA
chr4 110467725 110472350 enh36920 110481361 9011
Astrocyte Prostate (PC-3) Prostate (RWPE1) Lung (PC-9)
chr4 110469853 110470280 vista45625 110481361 11081
VISTA
chr4 110485865 110490335 enh8136 110481361 4504
Blood (Karpas-422)
chr4 110493585 110500575 enh8137 110481361 12224
Muscle (A673) Placenta Blood (Karpas-422) Spleen Muscle (Myotube) Blood (T-cell)
chr4 110497403 110497694 vista45626 110481361 16042
VISTA
chr4 110507405 110514255 enh8138 110481361 26044
Esophagus Blood (OCI-LY7) Placenta Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7)
chr4 110518505 110522675 enh107988 110481361 37144
Blood (T-cell)
chr4 110526625 110540375 enh8139 110481361 45264
Placenta Uterus Blood (Karpas-422)
chr4 110541865 110546315 enh54915 110481361 60504
Large Intestine
chr4 110546645 110555155 enh54916 110481361 65284
Prostate (PC-3) Uterus Large Intestine
chr4 110569165 110576175 enh8140 110481361 87804
Blood (Karpas-422)
Transcript facotrs that regulate CCDC109B[ENSG00000005059.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 110485923 110485926 MYB TRANSFAC yes 110481361 4562 92001579
chr4 110485928 110485937 ZEB1 JASPAR yes 110481361 4567 92001580
chr4 110485930 110485935 SP1 TRANSFAC yes 110481361 4569 92001581
chr4 110485931 110485945 PLAG1 JASPAR yes 110481361 4570 92001582
chr4 110485932 110485937 TFAP2A TRANSFAC yes 110481361 4571 92001583
chr4 110485932 110485938 MZF1 JASPAR yes 110481361 4571 92001584
chr4 110485933 110485943 SP1 JASPAR yes 110481361 4572 92001585
chr4 110485947 110485952 ETS2 TRANSFAC yes 110481361 4586 92001586
chr4 110485947 110485955 FEV JASPAR yes 110481361 4586 92001587
chr4 110485969 110485978 ZEB1 JASPAR yes 110481361 4608 92001588
chr4 110485973 110485982 THAP1 JASPAR yes 110481361 4612 92001589
chr4 110485975 110485996 ZNF263 JASPAR yes 110481361 4614 92001590
chr4 110485976 110485980 LFA1 TRANSFAC yes 110481361 4615 92001591
chr4 110485978 110485991 ELF1 JASPAR yes 110481361 4617 92001592
chr4 110485979 110485992 ELF3 JASPAR yes 110481361 4618 92001593
chr4 110485980 110485991 ELF5 JASPAR yes 110481361 4619 92001594
chr4 110485992 110485999 SPIB JASPAR yes 110481361 4631 92001595
chr4 110485994 110486005 FOXH1 JASPAR yes 110481361 4633 92001596
chr4 110485998 110486004 ZNF354C JASPAR yes 110481361 4637 92001597
chr4 110486029 110486032 MYB TRANSFAC yes 110481361 4668 92001598
chr4 110486039 110486051 YY1 JASPAR yes 110481361 4678 92001599
chr4 110486104 110486118 ONECUT1 JASPAR yes 110481361 4743 92001600
chr4 110486104 110486118 ONECUT2 JASPAR yes 110481361 4743 92001601
chr4 110486104 110486118 ONECUT3 JASPAR yes 110481361 4743 92001602
chr4 110486107 110486117 CUX1 JASPAR yes 110481361 4746 92001603
chr4 110486114 110486122 FOXL1 JASPAR yes 110481361 4753 92001604
chr4 110486135 110486139 LFA1 TRANSFAC yes 110481361 4774 92001605
chr4 110486153 110486159 SOX10 JASPAR yes 110481361 4792 92001606
chr4 110486191 110486201 ESX1 JASPAR yes 110481361 4830 92001607
chr4 110486192 110486200 BARX1 JASPAR yes 110481361 4831 92001608
chr4 110486197 110486200 MYB TRANSFAC yes 110481361 4836 92001609
chr4 110486199 110486219 TP53 JASPAR yes 110481361 4838 92001610
chr4 110486212 110486216 YY1 TRANSFAC yes 110481361 4851 92001611
chr4 110486239 110486254 MEF2C JASPAR yes 110481361 4878 92001612
chr4 110486242 110486246 YY1 TRANSFAC yes 110481361 4881 92001613
chr4 110486249 110486265 POU4F2 JASPAR yes 110481361 4888 92001614
chr4 110486249 110486265 POU4F3 JASPAR yes 110481361 4888 92001615
chr4 110486251 110486265 POU4F1 JASPAR yes 110481361 4890 92001616
chr4 110486252 110486266 FOXF2 JASPAR yes 110481361 4891 92001617
chr4 110486254 110486258 YY1 TRANSFAC yes 110481361 4893 92001618
chr4 110486256 110486270 PAX6 JASPAR yes 110481361 4895 92001619
chr4 110486273 110486283 GSX2 JASPAR yes 110481361 4912 92001620
chr4 110486274 110486282 BSX JASPAR yes 110481361 4913 92001621
chr4 110486274 110486284 HOXB13 JASPAR yes 110481361 4913 92001622
chr4 110486274 110486284 HOXD13 JASPAR yes 110481361 4913 92001623
chr4 110486276 110486280 YY1 TRANSFAC yes 110481361 4915 92001624
chr4 110486290 110486300 NFATC3 JASPAR yes 110481361 4929 92001625
chr4 110486292 110486299 NFATC2 JASPAR yes 110481361 4931 92001626
chr4 110486317 110486324 SPIB JASPAR yes 110481361 4956 92001627
chr4 110486317 110486338 ZNF263 JASPAR yes 110481361 4956 92001628
chr4 110486319 110486333 IRF7 JASPAR yes 110481361 4958 92001629
chr4 110486320 110486334 STAT1 JASPAR yes 110481361 4959 92001630
chr4 110486320 110486335 PRDM1 JASPAR yes 110481361 4959 92001631
chr4 110486320 110486335 STAT2 JASPAR yes 110481361 4959 92001632
chr4 110486320 110486338 IRF2 JASPAR yes 110481361 4959 92001633
chr4 110486320 110486341 ZNF263 JASPAR yes 110481361 4959 92001634
chr4 110486331 110486352 IRF1 JASPAR yes 110481361 4970 92001635
chr4 110486335 110486349 STAT1 JASPAR yes 110481361 4974 92001636
chr4 110486335 110486350 STAT2 JASPAR yes 110481361 4974 92001637
chr4 110486353 110486368 FOXA1 JASPAR yes 110481361 4992 92001638
chr4 110486359 110486371 TEF JASPAR yes 110481361 4998 92001639
chr4 110486360 110486368 FOXL1 JASPAR yes 110481361 4999 92001640
SNPs associated with CCDC109B[ENSG00000005059.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 110494732 rs10213562 T G 0 Esophagus 0.00304903 7744621
chr4 110553141 rs6533442 C G 0 Esophagus 0.0320369 7745206
chr4 111004928 rs17041360 G T 395054 Breast 0.386487 7746323
chr4 110553141 rs6533442 C G 0 Ovary 0.208908 7745206
chr4 109991299 rs112772566 G A 490062 Thyroid 0.176232 7742542
chr4 111012820 rs28572278 C T 402946 Liver 0.309292 7746465
Details of CCDC109B[ENSG00000005059.11]
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Genomic Location chr4:110481361-110609874[+]
TSS 110481361
Gene Name CCDC109B
Ensembl ID ENSG00000005059.11
ENTREZID
Uniprot
Protein Name
mitochondrial
Calcium uniporter regulatory subunit MCUb
Expression levels of CCDC109B[ENSG00000005059.11]
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