EnhancerDB
  1. Home
  2. SNP
  3. rs28572278[chr4:111012820]
Enhancers that have rs28572278[chr4:111012820]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 111004285 111013803 enh36923
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs28572278[chr4:111012820]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 111012813 111012824 ELF5 JASPAR yes 92021537
chr4 111012813 111012824 SPDEF JASPAR yes 92021538
chr4 111012813 111012825 EHF JASPAR yes 92021539
chr4 111012813 111012825 ELF4 JASPAR yes 92021540
Genes associated with rs28572278[chr4:111012820], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr4 110481361 110609874 + CCDC109B ENSG00000005059.11 110481361 402946 Liver 0.309292 4938