Enhancers that regulate CTNS[ENSG00000040531.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 3452085 3456815 enh81162 3539762 82947
chr17 3453416 3453706 vista23749 3539762 86056
chr17 3460153 3460261 vista23750 3539762 79501
chr17 3504662 3504760 vista23751 3539762 35002
chr17 3506905 3511055 enh92700 3539762 28707
chr17 3528425 3533295 enh16933 3539762 6467
chr17 3534813 3534835 vista23752 3539762 4927
chr17 3546275 3550405 enh60644 3539762 6513
chr17 3584365 3597315 enh4217 3539762 44603
chr17 3600340 3600752 vista23753 3539762 60578
chr17 3609785 3617815 enh32058 3539762 70023
chr17 3633545 3639855 enh109743 3539762 93783

Transcript facotrs that regulate CTNS[ENSG00000040531.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 3534356 3537016 ZBTB33 GTRD no Lung (A549) 3539762 2746 108231581
chr17 3534437 3536167 ZBTB33 GTRD no Lung (A549) 3539762 3595 108231582
chr17 3534520 3536334 ZNF274 GTRD no Bone Marrow (K562) 3539762 3428 108231583
chr17 3534520 3536446 ZNF274 GTRD no Bone Marrow (K562) 3539762 3316 108231584
chr17 3534637 3536423 TCF7L2 GTRD no Colon (HCT116) 3539762 3339 108231585
chr17 3534640 3536199 ZBTB33 GTRD no Lung (A549) 3539762 3563 108231586
chr17 3534662 3536435 ZNF274 GTRD no Blood (GM12878) 3539762 3327 108231587
chr17 3534668 3536229 TCF7L2 GTRD no Colon (HCT116) 3539762 3533 108231588
chr17 3534672 3536384 ZBTB33 GTRD no Lung (A549) 3539762 3378 108231589
chr17 3534675 3535250 ZNF143 GTRD no Epithelial (MCF-7) 3539762 4512 108231590
chr17 3534679 3536311 TCF7L2 GTRD no Colon (HCT116) 3539762 3451 108231591
chr17 3534682 3535281 ZNF143 GTRD no Epithelial (MCF-7) 3539762 4481 108231592
chr17 3534712 3536083 ZNF274 GTRD no Blood (GM12878) 3539762 3679 108231593
chr17 3534715 3535237 ZNF143 GTRD no Epithelial (MCF-7) 3539762 4525 108231594
chr17 3534722 3536079 TCF7L2 GTRD no Colon (HCT116) 3539762 3683 108231595
chr17 3534723 3536281 TCF7L2 GTRD no Colon (HCT116) 3539762 3481 108231596
chr17 3534732 3536290 TCF7L2 GTRD no Colon (HCT116) 3539762 3472 108231597
chr17 3534763 3536481 ZNF274 GTRD no Blood (GM12878) 3539762 3281 108231598
chr17 3534784 3535215 ZBTB33 GTRD no Lung (A549) 3539762 4547 108231599
chr17 3534807 3535330 ZNF143 GTRD no Epithelial (MCF-7) 3539762 4432 108231600
chr17 3534813 3534828 FOXP1 JASPAR yes 3539762 4934 21186190
chr17 3534813 3534834 IRF1 JASPAR yes 3539762 4928 21186191
chr17 3534814 3534829 FOXP1 JASPAR yes 3539762 4933 21186192
chr17 3534815 3534830 FOXP1 JASPAR yes 3539762 4932 21186193
chr17 3534816 3534831 FOXP1 JASPAR yes 3539762 4931 21186194
chr17 3534817 3534832 FOXP1 JASPAR yes 3539762 4930 21186195
chr17 3534818 3534833 FOXP1 JASPAR yes 3539762 4929 21186196
chr17 3534819 3534834 FOXP1 JASPAR yes 3539762 4928 21186197
chr17 3534820 3534835 FOXP1 JASPAR yes 3539762 4927 21186198
chr17 3534821 3536110 TCF7L2 GTRD no Colon (HCT116) 3539762 3652 108231601

Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 3613996 rs146763303 C T 49160 Liver 0.0167207 4707751

Genomic Location chr17:3539762-3564836[+]
TSS 3539762
Gene Name CTNS
Ensembl ID ENSG00000040531.10
ENTREZID 1497
Uniprot
A0A0S2Z3K3
O60931
A0A0S2Z3I9
Protein Name
CTNS protein
Cystinosin
Cystinosis nephropathic isoform 1
Cystinosis nephropathic isoform 2
Cystinosis nephropathic isoform 3