EnhancerDB
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Enhancers that regulate LETMD1[ENSG00000050426.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 51371005 51381715 enh29571 51441745 60030
Liver (HepG2) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Peripheral Blood (MM.1S) Muscle (Myoblast) Uterus Stomach
chr12 51410865 51420997 enh2352 51441745 20748
Bone Marrow (K562) Liver (HepG2) Prostate (RWPE1) Blood (T-cell) Blood (Karpas-422) Thymus Stomach
chr12 51428045 51436330 enh51207 51441745 5415
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9)
chr12 51461285 51466207 enh14714 51441745 19540
Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Large Intestine Placenta Lung (PC-9) Epithelial (MCF-7)
chr12 51514805 51529486 enh2353 51441745 73060
Large Intestine Prostate (RWPE1) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube)
chr12 51534048 51534251 vista13393 51441745 92303
VISTA
chr12 51536826 51537135 vista13394 51441745 95081
VISTA
Transcript facotrs that regulate LETMD1[ENSG00000050426.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LETMD1[ENSG00000050426.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 51483883 rs6580785 C T 29676 Esophagus 0.00151308 2629811
chr12 51464766 rs10876131 C T 10559 Heart 1.5749e-06 2629751
chr12 51464766 rs10876131 C T 10559 Heart 5.26798e-08 2629751
chr12 51784002 rs2114875 A T 329795 Breast 0.399243 2631072
chr12 51328163 rs319943 T A 113582 Ovary 0.0293472 2629099
chr12 51708714 rs117522705 A G 254507 Liver 0.248585 2630644
chr12 52189701 rs76419499 C T 735494 Lung 0.189175 2632519
Details of LETMD1[ENSG00000050426.11]
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Genomic Location chr12:51441745-51454207[+]
TSS 51441745
Gene Name LETMD1
Ensembl ID ENSG00000050426.11
ENTREZID 25875
Uniprot
F8W1Z2
Q6P1Q0
Protein Name
LETM1 domain-containing protein 1
Expression levels of LETMD1[ENSG00000050426.11]
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