EnhancerDB
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Enhancers that regulate PTPRN[ENSG00000054356.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 220112505 220116655 enh99789 220174370 57715
Uterus
chr2 220123965 220128115 enh91336 220174370 46255
Bone Marrow (K562)
chr2 220135829 220141715 enh19244 220174370 32655
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
chr2 220138813 220139187 vista34808 220174370 35183
VISTA
chr2 220148565 220157775 enh62916 220174370 16595
Esophagus Uterus Brain (SK-N-SH) Heart
chr2 220207565 220211755 enh94429 220174370 33195
Spleen Lung Stomach
chr2 220213425 220219415 enh34277 220174370 39055
Astrocyte
chr2 220215460 220215932 vista34809 220174370 41090
VISTA
chr2 220225093 220230057 enh44999 220174370 50723
Prostate (PC-3) Esophagus Peripheral Blood (MM.1S) Colon (HCT116) Muscle (Myotube)
chr2 220231345 220236575 enh19245 220174370 56975
Cervix (HeLa-S3) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Pancreas Uterus Epithelial (MCF-7)
chr2 220269765 220275755 enh19246 220174370 95395
Astrocyte Placenta Uterus Heart
chr2 220271494 220272006 vista1007 220174370 97124
VISTA
Transcript facotrs that regulate PTPRN[ENSG00000054356.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with PTPRN[ENSG00000054356.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 220777934 rs59505527 T A,C 603564 Esophagus 0.283777 6374754
chr2 219819689 rs113891604 C A,T 334656 Pancreas 0.246964 6369876
chr2 220361942 rs142341543 G A 187572 Spleen 0.128801 6372023
chr2 220541172 rs10498065 C T 366802 Lung 0.345708 6372899
chr2 220521820 rs55930250 G A 347450 Adrenal 0.236865 6372684
Details of PTPRN[ENSG00000054356.9]
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Genomic Location chr2:220154345-220174370[-]
TSS 220174370
Gene Name PTPRN
Ensembl ID ENSG00000054356.9
ENTREZID 5798
Uniprot
Q96IA0
Q16849
Protein Name
N
receptor type
PTPRN protein
Protein tyrosine phosphatase
Receptor-type tyrosine-protein phosphatase-like N
Expression levels of PTPRN[ENSG00000054356.9]
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