EnhancerDB
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Enhancers that regulate SLC6A16[ENSG00000063127.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 49723345 49731535 enh76146 49828482 96947
Muscle (A673) Colon (HCT116) Brain (SK-N-MC)
chr19 49765625 49769775 enh104533 49828482 58707
Peripheral Blood (MM.1S)
chr19 49772405 49779179 enh32975 49828482 49303
Skin (Keratinocyte) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Epithelial (MCF-7)
chr19 49775600 49775657 vista29766 49828482 52825
VISTA
chr19 49802605 49807435 enh5194 49828482 21047
Bone Marrow (K562) Blood (Karpas-422)
chr19 49832847 49832906 vista29767 49828482 4365
VISTA
chr19 49836983 49837445 vista29768 49828482 8501
VISTA
chr19 49840125 49847975 enh5195 49828482 11643
Blood (Karpas-422)
chr19 49874345 49892555 enh5196 49828482 45863
Blood (OCI-LY7) Blood (Karpas-422)
chr19 49896315 49896677 vista29769 49828482 67833
VISTA
chr19 49902151 49915655 enh5197 49828482 73669
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (OCI-LY7) Muscle (A673) Blood (Karpas-422) Neural Stem Cells (H9) Epithelial (MCF-7)
chr19 49924099 49924476 vista29770 49828482 95617
VISTA
Transcript facotrs that regulate SLC6A16[ENSG00000063127.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 49832678 49833201 MYOD GTRD no Muscle (Myoblast) 49828482 4196 108423249
chr19 49832856 49832860 LFA1 TRANSFAC yes 49828482 4374 70866621
chr19 49832873 49832894 IRF1 JASPAR yes 49828482 4391 70866622
chr19 49832874 49832889 FOXP1 JASPAR yes 49828482 4392 70866623
chr19 49832874 49832895 IRF1 JASPAR yes 49828482 4392 70866624
chr19 49832875 49832896 IRF1 JASPAR yes 49828482 4393 70866625
chr19 49832876 49832891 FOXP1 JASPAR yes 49828482 4394 70866626
chr19 49832876 49832897 IRF1 JASPAR yes 49828482 4394 70866627
chr19 49832877 49832898 IRF1 JASPAR yes 49828482 4395 70866628
chr19 49832878 49832893 FOXP1 JASPAR yes 49828482 4396 70866629
chr19 49832878 49832899 IRF1 JASPAR yes 49828482 4396 70866630
chr19 49832879 49832894 FOXP1 JASPAR yes 49828482 4397 70866631
chr19 49832879 49832900 IRF1 JASPAR yes 49828482 4397 70866632
chr19 49832880 49832895 FOXP1 JASPAR yes 49828482 4398 70866633
chr19 49832880 49832901 IRF1 JASPAR yes 49828482 4398 70866634
chr19 49832881 49832896 FOXP1 JASPAR yes 49828482 4399 70866635
chr19 49832881 49832902 IRF1 JASPAR yes 49828482 4399 70866636
chr19 49832882 49832897 FOXP1 JASPAR yes 49828482 4400 70866637
chr19 49832882 49832903 IRF1 JASPAR yes 49828482 4400 70866638
chr19 49832883 49832898 FOXP1 JASPAR yes 49828482 4401 70866639
chr19 49832883 49832904 IRF1 JASPAR yes 49828482 4401 70866640
chr19 49832884 49832899 FOXP1 JASPAR yes 49828482 4402 70866641
chr19 49832884 49832905 IRF1 JASPAR yes 49828482 4402 70866642
chr19 49832885 49832900 FOXP1 JASPAR yes 49828482 4403 70866643
chr19 49832886 49832901 FOXP1 JASPAR yes 49828482 4404 70866644
chr19 49832887 49832902 FOXP1 JASPAR yes 49828482 4405 70866645
chr19 49832888 49832903 FOXP1 JASPAR yes 49828482 4406 70866646
chr19 49832889 49832904 FOXP1 JASPAR yes 49828482 4407 70866647
chr19 49832890 49832905 FOXP1 JASPAR yes 49828482 4408 70866648
chr19 49832891 49832906 FOXP1 JASPAR yes 49828482 4409 70866649
SNPs associated with SLC6A16[ENSG00000063127.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of SLC6A16[ENSG00000063127.11]
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Genomic Location chr19:49792895-49828482[-]
TSS 49828482
Gene Name SLC6A16
Ensembl ID ENSG00000063127.11
ENTREZID 28968
Uniprot
Q9GZN6
Protein Name
Orphan sodium- and chloride-dependent neurotransmitter transporter NTT5
Expression levels of SLC6A16[ENSG00000063127.11]
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