EnhancerDB
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Enhancers that regulate MGAT4A[ENSG00000071073.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 99250910 99251133 vista32423 99347589 96456
VISTA
chr2 99262205 99268291 enh18747 99347589 79298
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Placenta Spleen Uterus Thymus Stomach
chr2 99268200 99268767 vista32424 99347589 78822
VISTA
chr2 99273192 99273525 vista32425 99347589 74064
VISTA
chr2 99275957 99276143 vista32426 99347589 71446
VISTA
chr2 99284305 99288455 enh88474 99347589 59134
Pancreas
chr2 99287467 99287477 vista32427 99347589 60112
VISTA
chr2 99305905 99312235 enh92910 99347589 35354
Liver (HepG2) Blood (T-cell)
chr2 99307845 99308079 vista32428 99347589 39510
VISTA
chr2 99315745 99336355 enh53202 99347589 11234
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung Blood (GM12878) Stomach Muscle (A673) Thyroid Pancreas Uterus Blood (T-cell) Heart
chr2 99318923 99319110 vista32429 99347589 28479
VISTA
chr2 99344413 99344676 vista32430 99347589 2913
VISTA
chr2 99352445 99356975 enh88475 99347589 4856
Pancreas
chr2 99358381 99362555 enh65296 99347589 10792
Stomach Blood (T-cell) Heart
chr2 99363595 99370755 enh18748 99347589 16006
Placenta Brain (SK-N-MC) Blood (GM12878)
chr2 99365504 99365840 vista32431 99347589 17915
VISTA
chr2 99371385 99394395 enh5722 99347589 23796
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Blood (T-cell) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Heart
chr2 99374660 99374852 vista32432 99347589 27071
VISTA
chr2 99387536 99387795 vista32433 99347589 39947
VISTA
chr2 99391741 99391953 vista32434 99347589 44152
VISTA
chr2 99413565 99425855 enh18749 99347589 65976
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Liver Brain (SK-N-SH) Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Thymus Heart
chr2 99432845 99436995 enh108777 99347589 85256
Lung (PC-9)
chr2 99443305 99448615 enh81747 99347589 95716
Prostate (PC-3) Lung (PC-9)
Transcript facotrs that regulate MGAT4A[ENSG00000071073.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 99344418 99344433 HNF4G JASPAR yes 99347589 3156 22098199
chr2 99344419 99344433 NR2F1 JASPAR yes 99347589 3156 22098200
chr2 99344419 99344434 HNF4A JASPAR yes 99347589 3155 22098201
chr2 99344445 99344466 IRF1 JASPAR yes 99347589 3123 22098202
chr2 99344447 99344462 PRDM1 JASPAR yes 99347589 3127 22098203
chr2 99344450 99344461 E2F6 JASPAR yes 99347589 3128 22098204
chr2 99344474 99344484 ID4 JASPAR yes 99347589 3105 22098205
chr2 99344474 99344484 TCF4 JASPAR yes 99347589 3105 22098206
chr2 99344476 99344481 USF2 TRANSFAC yes 99347589 3108 22098207
chr2 99344504 99344509 GATA2 JASPAR yes 99347589 3080 22098208
chr2 99344560 99344566 TBP TRANSFAC yes 99347589 3023 22098209
chr2 99344560 99344571 FOXC1 JASPAR yes 99347589 3018 22098210
chr2 99344560 99344572 FOXC2 JASPAR yes 99347589 3017 22098211
chr2 99344562 99344576 ONECUT2 JASPAR yes 99347589 3013 22098212
chr2 99344562 99344576 ONECUT3 JASPAR yes 99347589 3013 22098213
chr2 99344564 99344575 PROP1 JASPAR yes 99347589 3014 22098214
chr2 99344566 99344580 POU4F1 JASPAR yes 99347589 3009 22098215
chr2 99344569 99344580 NFIL3 JASPAR yes 99347589 3009 22098216
chr2 99344570 99344582 DBP JASPAR yes 99347589 3007 22098217
chr2 99344570 99344582 HLF JASPAR yes 99347589 3007 22098218
chr2 99344570 99344582 TEF JASPAR yes 99347589 3007 22098219
chr2 99344572 99344583 NFIL3 JASPAR yes 99347589 3006 22098220
chr2 99344575 99344579 TEAD2 TRANSFAC yes 99347589 3010 22098221
chr2 99344577 99344580 MYB TRANSFAC yes 99347589 3009 22098222
chr2 99344604 99344615 CEBPB JASPAR yes 99347589 2974 22098223
chr2 99344605 99344616 CEBPA JASPAR yes 99347589 2973 22098224
chr2 99344606 99344620 POU4F1 JASPAR yes 99347589 2969 22098225
chr2 99344606 99344622 POU4F3 JASPAR yes 99347589 2967 22098226
chr2 99344611 99344626 STAT1 JASPAR yes 99347589 2963 22098227
chr2 99344614 99344626 POU2F1 JASPAR yes 99347589 2963 22098228
chr2 99344614 99344627 POU3F3 JASPAR yes 99347589 2962 22098229
chr2 99344615 99344627 POU3F1 JASPAR yes 99347589 2962 22098230
chr2 99344615 99344627 POU3F2 JASPAR yes 99347589 2962 22098231
chr2 99344616 99344626 NFATC3 JASPAR yes 99347589 2963 22098232
chr2 99344626 99344632 TCF1 TRANSFAC yes 99347589 2957 22098233
chr2 99344633 99344648 FOXA1 JASPAR yes 99347589 2941 22098234
chr2 99344635 99344643 FOXL1 JASPAR yes 99347589 2946 22098235
chr2 99344635 99344647 FOXC2 JASPAR yes 99347589 2942 22098236
chr2 99344636 99344644 FOXG1 JASPAR yes 99347589 2945 22098237
chr2 99344636 99344647 FOXB1 JASPAR yes 99347589 2942 22098238
chr2 99344636 99344647 FOXC1 JASPAR yes 99347589 2942 22098239
chr2 99344650 99344659 SRY JASPAR yes 99347589 2930 22098240
chr2 99344662 99344673 ELK4 JASPAR yes 99347589 2916 22098241
chr2 99344662 99344673 FLI1 JASPAR yes 99347589 2916 22098242
chr2 99344663 99344673 ELK1 JASPAR yes 99347589 2916 22098243
chr2 99344663 99344673 ELK3 JASPAR yes 99347589 2916 22098244
chr2 99344663 99344673 ERF JASPAR yes 99347589 2916 22098245
chr2 99344663 99344673 ERG JASPAR yes 99347589 2916 22098246
chr2 99344663 99344673 ETS1 JASPAR yes 99347589 2916 22098247
chr2 99344663 99344673 ETV1 JASPAR yes 99347589 2916 22098248
chr2 99344663 99344673 ETV3 JASPAR yes 99347589 2916 22098249
chr2 99344663 99344673 ETV4 JASPAR yes 99347589 2916 22098250
chr2 99344663 99344673 ETV6 JASPAR yes 99347589 2916 22098251
chr2 99344663 99344673 FEV JASPAR yes 99347589 2916 22098252
chr2 99344663 99344673 FLI1 JASPAR yes 99347589 2916 22098253
chr2 99344663 99344673 GABPA JASPAR yes 99347589 2916 22098254
chr2 99344663 99344674 ELF5 JASPAR yes 99347589 2915 22098255
chr2 99344663 99344674 ETV2 JASPAR yes 99347589 2915 22098256
chr2 99344663 99344675 ELF4 JASPAR yes 99347589 2914 22098257
chr2 99344663 99344676 ELF1 JASPAR yes 99347589 2913 22098258
chr2 99344664 99344671 SPI1 JASPAR yes 99347589 2918 22098259
chr2 99344664 99344672 EHF JASPAR yes 99347589 2917 22098260
chr2 99344664 99344672 FEV JASPAR yes 99347589 2917 22098261
chr2 99352445 99352449 TEAD2 TRANSFAC yes 99347589 4856 75671434
chr2 99352457 99352461 LFA1 TRANSFAC yes 99347589 4868 75671435
chr2 99352530 99352536 ZNF354C JASPAR yes 99347589 4941 75671436
chr2 99352548 99352562 TCF7L2 JASPAR yes 99347589 4959 75671437
chr2 99352552 99352558 TCF4 TRANSFAC yes 99347589 4963 75671438
chr2 99352565 99352570 H4TF1 TRANSFAC yes 99347589 4976 75671439
chr2 99352571 99352574 MYB TRANSFAC yes 99347589 4982 75671440
chr2 99352586 99352598 FOXC2 JASPAR yes 99347589 4997 75671441
chr2 99352587 99352598 FOXC1 JASPAR yes 99347589 4998 75671442
chr2 99352587 99352608 IRF1 JASPAR yes 99347589 4998 75671443
chr2 99352588 99352592 YY1 TRANSFAC yes 99347589 4999 75671444
chr2 99352589 99352604 FOXP1 JASPAR yes 99347589 5000 75671445
SNPs associated with MGAT4A[ENSG00000071073.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 99511774 rs10178956 T G 164185 Esophagus 0.0874289 5907707
chr2 100261451 rs17022829 C G 913862 Esophagus 0.284228 5909330
chr2 99265375 rs35948284 T TG 0 Esophagus 0.00621282 5906280
chr2 99351716 rs10177696 A G 4127 Heart 0.0324154 5906664
chr2 100269599 rs72817046 C A 922010 Ovary 0.426198 5909393
chr2 99186183 rs55676747 T C 49386 Thyroid 0.0273973 5906148
chr2 98951825 rs116602655 G C 283744 Stomach 0.235618 5905133
chr2 99374111 rs148525684 G A 26522 Adrenal 0.12325 5906873
Details of MGAT4A[ENSG00000071073.8]
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Genomic Location chr2:99235569-99347589[-]
TSS 99347589
Gene Name MGAT4A
Ensembl ID ENSG00000071073.8
ENTREZID 11320
Uniprot
Q9UM21
Protein Name
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
Expression levels of MGAT4A[ENSG00000071073.8]
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