EnhancerDB
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Enhancers that regulate SMPD3[ENSG00000103056.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 68409705 68420455 enh4106 68482591 62136
Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
chr16 68415381 68415552 vista22815 68482591 67039
VISTA
chr16 68418958 68419037 vista22816 68482591 63554
VISTA
chr16 68420905 68425055 enh109725 68482591 57536
Stomach
chr16 68431980 68446195 enh31891 68482591 36396
Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Thymus Epithelial (MCF-7)
chr16 68433458 68433594 vista22817 68482591 48997
VISTA
chr16 68440761 68441227 vista22818 68482591 41364
VISTA
chr16 68447985 68455095 enh4107 68482591 27496
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Liver Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
chr16 68451680 68452082 vista22819 68482591 30509
VISTA
chr16 68458045 68462195 enh107684 68482591 20396
Blood (T-cell)
chr16 68465013 68465120 vista22820 68482591 17471
VISTA
chr16 68466845 68471015 enh96702 68482591 11576
Stomach Epithelial (MCF-7)
chr16 68468062 68468227 vista22821 68482591 14364
VISTA
chr16 68500105 68506695 enh47967 68482591 17514
Blood (T-cell) Stomach Peripheral Blood (MM.1S) Pancreas Thymus Heart
chr16 68503731 68504029 vista22822 68482591 21140
VISTA
chr16 68504537 68504688 vista22823 68482591 21946
VISTA
chr16 68507065 68517815 enh52298 68482591 24474
Esophagus Lung (PC-9) Large Intestine Epithelial (MCF-7)
chr16 68518845 68532755 enh4108 68482591 36254
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
chr16 68526458 68526774 vista22824 68482591 43867
VISTA
chr16 68532985 68533160 vista22825 68482591 50394
VISTA
chr16 68542125 68546275 enh88251 68482591 59534
Pancreas
chr16 68544131 68544336 vista22826 68482591 61540
VISTA
chr16 68549845 68556835 enh4109 68482591 67254
Pancreas Cervix (HeLa-S3) Blood (T-cell) Blood (Karpas-422)
chr16 68580965 68585115 enh107685 68482591 98374
Blood (T-cell)
Transcript facotrs that regulate SMPD3[ENSG00000103056.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SMPD3[ENSG00000103056.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 68839756 rs11863754 A G 357165 Esophagus 0.0642442 4503089
chr16 68436210 rs6499174 G A 0 Esophagus 0.0488823 4500380
chr16 67600349 rs201385093 G GTTGC 791882 Heart 0.233444 4497245
chr16 67494399 rs79436995 A C 897832 Ovary 0.0189124 4496418
chr16 67540018 rs8055865 C T 852213 Liver 0.242666 4496788
chr16 67636431 rs78239283 G A 755800 Lung 0.0532445 4497353
chr16 67784405 rs143108650 C A 607826 Stomach 0.420684 4497732
chr16 68398862 rs73615919 C T 0 Adrenal 0.033124 4500144
Details of SMPD3[ENSG00000103056.7]
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Genomic Location chr16:68392231-68482591[-]
TSS 68482591
Gene Name SMPD3
Ensembl ID ENSG00000103056.7
ENTREZID 55512
Uniprot
Q9NY59
A8K0T6
Protein Name
Neutral sphingomyelinase type 2
Sphingomyelin phosphodiesterase
Sphingomyelin phosphodiesterase 3
Expression levels of SMPD3[ENSG00000103056.7]
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