EnhancerDB
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Enhancers that regulate PHACTR1[ENSG00000112137.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 12625885 12631015 enh77802 12717893 86878
Muscle (A673)
chr6 12634205 12640415 enh38804 12717893 77478
Astrocyte
chr6 12638264 12638403 vista50924 12717893 79490
VISTA
chr6 12655345 12659495 enh114149 12717893 58398
Brain (SK-N-MC)
chr6 12677645 12681795 enh55644 12717893 36098
Large Intestine
chr6 12720364 12720793 vista50925 12717893 2471
VISTA
chr6 12729754 12730156 vista50926 12717893 11861
VISTA
chr6 12731745 12736455 enh77803 12717893 13852
Muscle (A673)
chr6 12757628 12757881 vista50927 12717893 39735
VISTA
chr6 12759510 12765215 enh38805 12717893 41617
Muscle (Myoblast) Astrocyte Muscle (Myotube)
chr6 12771306 12771602 vista50928 12717893 53413
VISTA
chr6 12774576 12787775 enh23040 12717893 56683
Muscle (Myotube) Placenta Epithelial (MCF-7)
chr6 12795944 12795984 vista50929 12717893 78051
VISTA
chr6 12799410 12799555 vista50930 12717893 81517
VISTA
chr6 12799505 12805955 enh23041 12717893 81612
Placenta
chr6 12811662 12818615 enh95214 12717893 93769
Muscle (Myoblast) Epithelial (MCF-7)
Transcript facotrs that regulate PHACTR1[ENSG00000112137.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 12720366 12720381 HSF1 JASPAR yes 12717893 2473 70314577
chr6 12720367 12720380 HSF1 JASPAR yes 12717893 2474 70314578
chr6 12720367 12720380 HSF2 JASPAR yes 12717893 2474 70314579
chr6 12720367 12720380 HSF4 JASPAR yes 12717893 2474 70314580
chr6 12720393 12720414 ZNF263 JASPAR yes 12717893 2500 70314581
chr6 12720399 12720411 INSM1 JASPAR yes 12717893 2506 70314582
chr6 12720404 12720414 SP1 JASPAR yes 12717893 2511 70314583
chr6 12720404 12720425 ZNF263 JASPAR yes 12717893 2511 70314584
chr6 12720407 12720412 SP1 TRANSFAC yes 12717893 2514 70314585
chr6 12720431 12720436 ETS2 TRANSFAC yes 12717893 2538 70314586
chr6 12720444 12720454 RORA JASPAR yes 12717893 2551 70314587
chr6 12720445 12720456 ESRRA JASPAR yes 12717893 2552 70314588
chr6 12720445 12720456 ESRRB JASPAR yes 12717893 2552 70314589
chr6 12720447 12720455 NR4A2 JASPAR yes 12717893 2554 70314590
chr6 12720447 12720460 EOMES JASPAR yes 12717893 2554 70314591
chr6 12720449 12720453 ESR1 TRANSFAC yes 12717893 2556 70314592
chr6 12720450 12720460 TBX21 JASPAR yes 12717893 2557 70314593
chr6 12720459 12720477 NFYA JASPAR yes 12717893 2566 70314594
chr6 12720462 12720478 NFYA JASPAR yes 12717893 2569 70314595
chr6 12720465 12720480 NFYB JASPAR yes 12717893 2572 70314596
chr6 12720467 12720472 NFY TRANSFAC yes 12717893 2574 70314597
chr6 12720471 12720475 H4TF2 TRANSFAC yes 12717893 2578 70314598
chr6 12720483 12720498 JUND JASPAR yes 12717893 2590 70314599
chr6 12720512 12720516 ESR1 TRANSFAC yes 12717893 2619 70314600
chr6 12720536 12720546 NFIA JASPAR yes 12717893 2643 70314601
chr6 12720538 12720544 NFIC JASPAR yes 12717893 2645 70314602
chr6 12720538 12720559 IRF1 JASPAR yes 12717893 2645 70314603
chr6 12720556 12720560 LFA1 TRANSFAC yes 12717893 2663 70314604
chr6 12720563 12720573 POU6F2 JASPAR yes 12717893 2670 70314605
chr6 12720564 12720574 ALX3 JASPAR yes 12717893 2671 70314606
chr6 12720564 12720574 HOXB2 JASPAR yes 12717893 2671 70314607
chr6 12720564 12720574 MNX1 JASPAR yes 12717893 2671 70314608
chr6 12720564 12720576 HNF1B JASPAR yes 12717893 2671 70314609
chr6 12720564 12720576 MEF2A JASPAR yes 12717893 2671 70314610
chr6 12720564 12720576 MEF2B JASPAR yes 12717893 2671 70314611
chr6 12720564 12720576 MEF2D JASPAR yes 12717893 2671 70314612
chr6 12720565 12720573 LMX1A JASPAR yes 12717893 2672 70314613
chr6 12720565 12720573 LMX1B JASPAR yes 12717893 2672 70314614
chr6 12720565 12720573 NKX6-1 JASPAR yes 12717893 2672 70314615
chr6 12720565 12720573 NKX6-2 JASPAR yes 12717893 2672 70314616
chr6 12720565 12720573 VAX1 JASPAR yes 12717893 2672 70314617
chr6 12720565 12720573 VAX2 JASPAR yes 12717893 2672 70314618
chr6 12720565 12720573 VSX1 JASPAR yes 12717893 2672 70314619
chr6 12720565 12720573 VSX2 JASPAR yes 12717893 2672 70314620
chr6 12720565 12720575 MEF2A JASPAR yes 12717893 2672 70314621
chr6 12720589 12720593 YY1 TRANSFAC yes 12717893 2696 70314622
chr6 12720604 12720609 TFAP2A TRANSFAC yes 12717893 2711 70314623
chr6 12720604 12720610 MZF1 JASPAR yes 12717893 2711 70314624
chr6 12720651 12720657 ETS1 JASPAR yes 12717893 2758 70314625
chr6 12720651 12720657 SPI1 JASPAR yes 12717893 2758 70314626
chr6 12720654 12720659 ETS2 TRANSFAC yes 12717893 2761 70314627
chr6 12720708 12720727 CTCF JASPAR yes 12717893 2815 70314628
chr6 12720717 12720738 ZNF263 JASPAR yes 12717893 2824 70314629
chr6 12720737 12720741 ESR1 TRANSFAC yes 12717893 2844 70314630
chr6 12720756 12720771 RUNX2 JASPAR yes 12717893 2863 70314631
chr6 12720759 12720770 RUNX1 JASPAR yes 12717893 2866 70314632
chr6 12720760 12720770 RUNX3 JASPAR yes 12717893 2867 70314633
chr6 12720761 12720770 RUNX2 JASPAR yes 12717893 2868 70314634
SNPs associated with PHACTR1[ENSG00000112137.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 13030256 rs9369762 G A 0 Breast 0.0289194 8841703
chr6 13432162 rs60004245 G A 143517 Spleen 0.0625219 8844365
chr6 13273318 rs202054 A C,G 0 Ovary 0.00027196 8842834
chr6 13361765 rs2496161 A C,G 73120 Liver 0.477294 8843368
chr6 13428803 rs16874155 G A 140158 Lung 0.0040798 8844325
chr6 11875535 rs9357216 C T 842358 Stomach 0.129274 8834471
Details of PHACTR1[ENSG00000112137.12]
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Genomic Location chr6:12717893-13288645[+]
TSS 12717893
Gene Name PHACTR1
Ensembl ID ENSG00000112137.12
ENTREZID 221692
Uniprot
Q9C0D0
B4DHU0
Protein Name
Phosphatase and actin regulator
Phosphatase and actin regulator 1
Expression levels of PHACTR1[ENSG00000112137.12]
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