EnhancerDB
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Enhancers that regulate CLCN2[ENSG00000114859.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 183980250 183980567 vista43437 184079439 98872
VISTA
chr3 184057655 184062155 enh90216 184079439 17284
Prostate (RWPE1)
chr3 184078263 184078665 vista43438 184079439 774
VISTA
chr3 184089326 184093652 enh45582 184079439 9887
Muscle (Myotube)
chr3 184131045 184138049 enh45583 184079439 51606
Muscle (Myotube) Liver (HepG2)
chr3 184139485 184149031 enh36210 184079439 60046
Prostate (RWPE1) Astrocyte Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube)
chr3 184156025 184163899 enh21157 184079439 76586
Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Epithelial (MCF-7)
chr3 184158085 184158429 vista43439 184079439 78646
VISTA
chr3 184164689 184168915 enh36211 184079439 85250
Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Lung (PC-9) Stomach
chr3 184175205 184179395 enh36212 184079439 95766
Astrocyte Cervix (HeLa-S3)
Transcript facotrs that regulate CLCN2[ENSG00000114859.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 184078266 184078274 TBX15 JASPAR yes 184079439 1165 71099051
chr3 184078285 184078296 FOSL1 JASPAR yes 184079439 1143 71099052
chr3 184078287 184078298 BATF JASPAR yes 184079439 1141 71099053
chr3 184078310 184078313 MYB TRANSFAC yes 184079439 1126 71099054
chr3 184078312 184078321 HIC2 JASPAR yes 184079439 1118 71099055
chr3 184078315 184078319 LFA1 TRANSFAC yes 184079439 1120 71099056
chr3 184078352 184078363 E2F6 JASPAR yes 184079439 1076 71099057
chr3 184078352 184078373 ZNF263 JASPAR yes 184079439 1066 71099058
chr3 184078366 184078378 TEAD1 JASPAR yes 184079439 1061 71099059
chr3 184078368 184078376 EHF JASPAR yes 184079439 1063 71099060
chr3 184078375 184078379 LFA1 TRANSFAC yes 184079439 1060 71099061
chr3 184078378 184078388 TEAD4 JASPAR yes 184079439 1051 71099062
chr3 184078381 184078401 TP63 JASPAR yes 184079439 1038 71099063
chr3 184078393 184078404 HOXC13 JASPAR yes 184079439 1035 71099064
chr3 184078402 184078407 ETS2 TRANSFAC yes 184079439 1032 71099065
chr3 184078415 184078426 FLI1 JASPAR yes 184079439 1013 71099066
chr3 184078417 184078425 EHF JASPAR yes 184079439 1014 71099067
chr3 184078419 184078424 ETS2 TRANSFAC yes 184079439 1015 71099068
chr3 184078423 184078437 EBF1 JASPAR yes 184079439 1002 71099069
chr3 184078424 184078436 TFAP2C JASPAR yes 184079439 1003 71099070
chr3 184078424 184078439 TFAP2C JASPAR yes 184079439 1000 71099071
chr3 184078426 184078435 TFAP2A JASPAR yes 184079439 1004 71099072
chr3 184078459 184078466 CEBPA TRANSFAC yes 184079439 973 71099073
chr3 184078461 184078474 NR2F1 JASPAR yes 184079439 965 71099074
chr3 184078464 184078478 CREB3 JASPAR yes 184079439 961 71099075
chr3 184078464 184078478 CREB3L1 JASPAR yes 184079439 961 71099076
chr3 184078465 184078469 ESR1 TRANSFAC yes 184079439 970 71099077
chr3 184078465 184078475 MAX JASPAR yes 184079439 964 71099078
chr3 184078465 184078476 USF1 JASPAR yes 184079439 963 71099079
chr3 184078465 184078476 USF2 JASPAR yes 184079439 963 71099080
chr3 184078466 184078476 BHLHE40 JASPAR yes 184079439 963 71099081
chr3 184078466 184078476 BHLHE41 JASPAR yes 184079439 963 71099082
chr3 184078466 184078476 HEY1 JASPAR yes 184079439 963 71099083
chr3 184078466 184078476 HEY2 JASPAR yes 184079439 963 71099084
chr3 184078466 184078476 MAX JASPAR yes 184079439 963 71099085
chr3 184078466 184078476 MLXIPL JASPAR yes 184079439 963 71099086
chr3 184078466 184078476 MLX JASPAR yes 184079439 963 71099087
chr3 184078466 184078476 MNT JASPAR yes 184079439 963 71099088
chr3 184078466 184078476 SREBF2 JASPAR yes 184079439 963 71099089
chr3 184078466 184078476 TFE3 JASPAR yes 184079439 963 71099090
chr3 184078466 184078476 TFEB JASPAR yes 184079439 963 71099091
chr3 184078466 184078476 TFEC JASPAR yes 184079439 963 71099092
chr3 184078466 184078477 USF1 JASPAR yes 184079439 962 71099093
chr3 184078466 184078477 USF2 JASPAR yes 184079439 962 71099094
chr3 184078467 184078477 MAX JASPAR yes 184079439 962 71099095
chr3 184078468 184078473 MYC TRANSFAC yes 184079439 966 71099096
chr3 184078468 184078473 USF1 TRANSFAC yes 184079439 966 71099097
chr3 184078468 184078473 USF2 TRANSFAC yes 184079439 966 71099098
chr3 184078468 184078475 USF1 JASPAR yes 184079439 964 71099099
chr3 184078491 184078494 MYB TRANSFAC yes 184079439 945 71099100
chr3 184078491 184078500 SOX9 JASPAR yes 184079439 939 71099101
chr3 184078509 184078519 SREBF2 JASPAR yes 184079439 920 71099102
chr3 184078536 184078546 GSX1 JASPAR yes 184079439 893 71099103
chr3 184078536 184078551 JUND JASPAR yes 184079439 888 71099104
chr3 184078537 184078547 POU6F2 JASPAR yes 184079439 892 71099105
chr3 184078537 184078550 JUN JASPAR yes 184079439 889 71099106
chr3 184078539 184078549 RORA JASPAR yes 184079439 890 71099107
chr3 184078540 184078553 NR2F1 JASPAR yes 184079439 886 71099108
chr3 184078541 184078549 CREB1 JASPAR yes 184079439 890 71099109
chr3 184078542 184078551 RARB TRANSFAC yes 184079439 888 71099110
chr3 184078542 184078556 RXRB JASPAR yes 184079439 883 71099111
chr3 184078542 184078556 RXRG JASPAR yes 184079439 883 71099112
chr3 184078544 184078548 ESR1 TRANSFAC yes 184079439 891 71099113
chr3 184078554 184078568 ZIC1 JASPAR yes 184079439 871 71099114
chr3 184078560 184078580 RREB1 JASPAR yes 184079439 859 71099115
chr3 184078561 184078571 SP1 JASPAR yes 184079439 868 71099116
chr3 184078564 184078569 SP1 TRANSFAC yes 184079439 870 71099117
chr3 184078565 184078575 SP1 JASPAR yes 184079439 864 71099118
chr3 184078568 184078573 SP1 TRANSFAC yes 184079439 866 71099119
chr3 184078578 184078583 GATA2 JASPAR yes 184079439 856 71099120
chr3 184078589 184078598 POU3F4 JASPAR yes 184079439 841 71099121
chr3 184078589 184078598 POU5F1B JASPAR yes 184079439 841 71099122
chr3 184078599 184078605 SOX10 JASPAR yes 184079439 834 71099123
chr3 184078604 184078608 H4TF2 TRANSFAC yes 184079439 831 71099124
chr3 184078608 184078612 H1TF2 TRANSFAC yes 184079439 827 71099125
chr3 184078608 184078612 NFE TRANSFAC yes 184079439 827 71099126
chr3 184078608 184078612 SRF TRANSFAC yes 184079439 827 71099127
chr3 184078613 184078634 ZNF263 JASPAR yes 184079439 805 71099128
chr3 184078634 184078644 SP1 JASPAR yes 184079439 795 71099129
chr3 184078654 184078658 NFE TRANSFAC yes 184079439 781 71099130
SNPs associated with CLCN2[ENSG00000114859.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 184209591 rs6767214 C A 130152 Heart 0.212668 7248978
chr3 184091149 rs6142 G T 11710 Breast 0.00119398 7248055
chr3 184473023 rs7428622 G C 393584 Spleen 0.234867 7251357
chr3 184091149 rs6142 G T 11710 Ovary 0.391731 7248055
Details of CLCN2[ENSG00000114859.10]
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Genomic Location chr3:184063973-184079439[-]
TSS 184079439
Gene Name CLCN2
Ensembl ID ENSG00000114859.10
ENTREZID 1181
Uniprot
P51788
Protein Name
Chloride channel 2 isoform 1
Chloride channel 2 isoform 4
Chloride channel 2 isoform 5
Chloride channel protein
Chloride channel protein 2
Chloride voltage-gated channel 2
Expression levels of CLCN2[ENSG00000114859.10]
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