EnhancerDB
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Enhancers that regulate TAF12[ENSG00000120656.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 28866306 28870454 enh85947 28969597 99143
Colon (HCT116)
chr1 28901545 28912835 enh188 28969597 56762
Pancreas (Panc1) Uterus Bone (Osteoblast) Blood (Karpas-422)
chr1 28921985 28928575 enh11682 28969597 41022
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Placenta Peripheral Blood (MM.1S) Lung (PC-9)
chr1 28956405 28963134 enh89472 28969597 6463
Peripheral Blood (MM.1S) Prostate (RWPE1)
chr1 28970474 28970729 vista1004 28969597 877
VISTA
chr1 28999925 29004415 enh11683 28969597 30328
Placenta Cervix (HeLa-S3)
chr1 29044985 29050655 enh11684 28969597 75388
Placenta
Transcript facotrs that regulate TAF12[ENSG00000120656.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 28969088 28970800 POLR2A UCSC Txn Factor no Conserved 28969597 509 107802663
chr1 28970487 28970502 NR2C2 JASPAR yes 28969597 890 118263150
chr1 28970490 28970495 SP1 TRANSFAC yes 28969597 893 118263151
chr1 28970495 28970512 ESR1 JASPAR yes 28969597 898 118263152
chr1 28970535 28970554 PAX5 JASPAR yes 28969597 938 118263153
chr1 28970555 28970559 NFE TRANSFAC yes 28969597 958 118263154
chr1 28970559 28970574 FOXP1 JASPAR yes 28969597 962 118263155
chr1 28970560 28970575 FOXP1 JASPAR yes 28969597 963 118263156
chr1 28970561 28970576 FOXP1 JASPAR yes 28969597 964 118263157
chr1 28970561 28970582 IRF1 JASPAR yes 28969597 964 118263158
chr1 28970562 28970577 FOXP1 JASPAR yes 28969597 965 118263159
chr1 28970563 28970584 IRF1 JASPAR yes 28969597 966 118263160
chr1 28970564 28970579 FOXP1 JASPAR yes 28969597 967 118263161
chr1 28970565 28970580 STAT2 JASPAR yes 28969597 968 118263162
chr1 28970565 28970586 IRF1 JASPAR yes 28969597 968 118263163
chr1 28970566 28970581 FOXP1 JASPAR yes 28969597 969 118263164
chr1 28970577 28970589 TAL1 JASPAR yes 28969597 980 118263165
chr1 28970578 28970591 ZBTB18 JASPAR yes 28969597 981 118263166
chr1 28970579 28970589 FIGLA JASPAR yes 28969597 982 118263167
chr1 28970579 28970589 MSC JASPAR yes 28969597 982 118263168
chr1 28970579 28970589 MYF6 JASPAR yes 28969597 982 118263169
chr1 28970579 28970589 TFAP4 JASPAR yes 28969597 982 118263170
chr1 28970579 28970591 TAL1 JASPAR yes 28969597 982 118263171
chr1 28970583 28970595 IRF1 JASPAR yes 28969597 986 118263172
chr1 28970588 28970592 YY1 TRANSFAC yes 28969597 991 118263173
chr1 28970588 28970603 FOXP1 JASPAR yes 28969597 991 118263174
chr1 28970602 28970615 HSF2 JASPAR yes 28969597 1005 118263175
chr1 28970604 28970614 TEAD1 JASPAR yes 28969597 1007 118263176
chr1 28970604 28970614 TEAD4 JASPAR yes 28969597 1007 118263177
chr1 28970605 28970613 TEAD3 JASPAR yes 28969597 1008 118263178
chr1 28970631 28970635 H1TF2 TRANSFAC yes 28969597 1034 118263179
chr1 28970631 28970635 NFE TRANSFAC yes 28969597 1034 118263180
chr1 28970631 28970635 SRF TRANSFAC yes 28969597 1034 118263181
chr1 28970638 28970651 ZBTB18 JASPAR yes 28969597 1041 118263182
chr1 28970642 28970656 NR2F1 JASPAR yes 28969597 1045 118263183
chr1 28970671 28970686 RUNX2 JASPAR yes 28969597 1074 118263184
chr1 28970672 28970682 RUNX3 JASPAR yes 28969597 1075 118263185
chr1 28970672 28970692 RREB1 JASPAR yes 28969597 1075 118263186
chr1 28970674 28970694 RREB1 JASPAR yes 28969597 1077 118263187
chr1 28970679 28970685 HiNF-A TRANSFAC yes 28969597 1082 118263188
chr1 28970696 28970700 TEAD2 TRANSFAC yes 28969597 1099 118263189
chr1 28970696 28970701 TBP TRANSFAC yes 28969597 1099 118263190
chr1 28970700 28970710 MSC JASPAR yes 28969597 1103 118263191
chr1 28970707 28970715 MEIS3 JASPAR yes 28969597 1110 118263192
chr1 28970707 28970727 ESR1 JASPAR yes 28969597 1110 118263193
chr1 28970711 28970729 ESR2 JASPAR yes 28969597 1114 118263194
SNPs associated with TAF12[ENSG00000120656.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 28634166 rs112509608 C A 281669 Esophagus 0.180051 191569
chr1 28449268 rs112542286 A G 466567 Esophagus 0.254348 190126
chr1 29727242 rs571160810 T C 757645 Heart 0.242124 196904
chr1 29047243 rs140897803 A G 77646 Spleen 0.261659 193789
chr1 27988849 rs2808432 C A 926986 Ovary 0.331827 187906
chr1 29562952 rs143468964 A G 593355 Thyroid 0.220503 196302
chr1 29002102 rs145771500 C T 32505 Lung 0.178633 193732
chr1 29712244 rs6656878 T C 742647 Stomach 0.400044 196837
Details of TAF12[ENSG00000120656.7]
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Genomic Location chr1:28915835-28969597[-]
TSS 28969597
Gene Name TAF12
Ensembl ID ENSG00000120656.7
ENTREZID 6883
Uniprot
Q16514
Protein Name
Transcription initiation factor TFIID subunit 12
Expression levels of TAF12[ENSG00000120656.7]
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