EnhancerDB
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Enhancers that regulate WNT1[ENSG00000125084.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 49273705 49285739 enh29564 49372398 86659
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
chr12 49276307 49276420 vista13317 49372398 95978
VISTA
chr12 49277442 49277626 vista13318 49372398 94772
VISTA
chr12 49299145 49303335 enh87960 49372398 69063
Pancreas Liver (HepG2)
chr12 49324785 49332435 enh47579 49372398 39963
Spleen Thymus Blood (T-cell)
chr12 49338845 49343755 enh101301 49372398 28643
Stomach Thyroid Lung (PC-9)
chr12 49370069 49370445 vista13319 49372398 1953
VISTA
chr12 49371065 49371287 vista13320 49372398 1111
VISTA
chr12 49380850 49380994 vista13321 49372398 8452
VISTA
chr12 49385035 49385339 vista13322 49372398 12637
VISTA
chr12 49385685 49391689 enh86103 49372398 13287
Colon (HCT116) Cervix (HeLa-S3) Prostate (RWPE1)
chr12 49441271 49445835 enh102464 49372398 68873
Bone (Osteoblast)
chr12 49447905 49452475 enh107543 49372398 75507
Blood (T-cell)
chr12 49449678 49450138 vista13323 49372398 77280
VISTA
chr12 49452736 49452852 vista13324 49372398 80338
VISTA
chr12 49471633 49475885 enh43736 49372398 99235
Muscle (Myoblast) Muscle (Myotube)
Transcript facotrs that regulate WNT1[ENSG00000125084.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 49365296 49370444 ZBTB33 GTRD no Lung (A549) 49372398 1954 108029630
chr12 49365306 49371047 ZNF274 GTRD no Blood (GM12878) 49372398 1351 108029631
chr12 49366090 49370791 ZNF274 GTRD no Blood (GM12878) 49372398 1607 108029632
chr12 49366102 49370447 ZBTB33 GTRD no Lung (A549) 49372398 1951 108029633
chr12 49366118 49370737 ZBTB33 GTRD no Lung (A549) 49372398 1661 108029634
chr12 49366169 49372104 ZNF274 GTRD no Blood (GM12878) 49372398 294 108029635
chr12 49366169 49372104 ZNF274 GTRD no Blood (GM12878) 49372398 294 108029636
chr12 49366236 49370703 ZBTB33 GTRD no Lung (A549) 49372398 1695 108029637
chr12 49368295 49370940 ZNF274 GTRD no Bone Marrow (K562) 49372398 1458 108029638
chr12 49368840 49371204 ZNF274 GTRD no Blood (GM12878) 49372398 1194 108029639
chr12 49368840 49371204 ZNF274 GTRD no Blood (GM12878) 49372398 1194 108029640
chr12 49369111 49370660 ZNF274 GTRD no Blood (GM12878) 49372398 1738 108029641
chr12 49369123 49370818 ZNF274 GTRD no Blood (GM12878) 49372398 1580 108029642
chr12 49369125 49370357 ZNF274 GTRD no Blood (GM12878) 49372398 2041 108029643
chr12 49369180 49370648 ZNF274 GTRD no Blood (GM12878) 49372398 1750 108029644
chr12 49369212 49370974 ZNF274 GTRD no Blood (GM12878) 49372398 1424 108029645
chr12 49369319 49370688 ZBTB33 GTRD no Lung (A549) 49372398 1710 108029646
chr12 49369334 49370588 ZNF274 GTRD no Blood (GM12878) 49372398 1810 108029647
chr12 49369383 49370714 ZNF274 GTRD no Blood (GM12878) 49372398 1684 108029648
chr12 49369403 49370635 ZNF274 GTRD no Bone Marrow (K562) 49372398 1763 108029649
chr12 49369419 49370318 ZNF274 GTRD no Blood (GM12878) 49372398 2080 108029650
chr12 49369429 49370429 ZNF274 GTRD no Blood (GM12878) 49372398 1969 108029651
chr12 49369434 49370429 ZNF274 GTRD no Blood (GM12878) 49372398 1969 108029652
chr12 49369465 49370596 ZBTB33 GTRD no Lung (A549) 49372398 1802 108029653
chr12 49369488 49370208 ZBTB33 GTRD no Brain (SK-N-SH) 49372398 2190 108029654
chr12 49369512 49370528 ZNF274 GTRD no Blood (GM12878) 49372398 1870 108029655
chr12 49369518 49370373 ZNF274 GTRD no Blood (GM12878) 49372398 2025 108029656
chr12 49369525 49370745 ZNF274 GTRD no Blood (GM12878) 49372398 1653 108029657
chr12 49369526 49370365 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2033 108029658
chr12 49369529 49370523 ZNF274 GTRD no Cervix (HeLa-S3) 49372398 1875 108029659
chr12 49369530 49370246 ZNF274 GTRD no Blood (GM12878) 49372398 2152 108029660
chr12 49369535 49370245 ZNF274 GTRD no Blood (GM12878) 49372398 2153 108029661
chr12 49369551 49370487 ZNF274 GTRD no Bone Marrow (K562) 49372398 1911 108029662
chr12 49369566 49370348 ZNF274 GTRD no Liver (HepG2) 49372398 2050 108029663
chr12 49369576 49370392 ZNF274 GTRD no Blood (GM12878) 49372398 2006 108029664
chr12 49369592 49370181 ZNF274 GTRD no Blood (GM12878) 49372398 2217 108029665
chr12 49369614 49370262 ZNF274 GTRD no Blood (GM12878) 49372398 2136 108029666
chr12 49369616 49370380 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2018 108029667
chr12 49369624 49370163 ZNF274 GTRD no Blood (GM12878) 49372398 2235 108029668
chr12 49369624 49370219 ZNF274 GTRD no Blood (GM12878) 49372398 2179 108029669
chr12 49369626 49370315 ZNF274 GTRD no Blood (GM12878) 49372398 2083 108029670
chr12 49369627 49370422 ZNF274 GTRD no Blood (GM12878) 49372398 1976 108029671
chr12 49369635 49370300 ZNF274 GTRD no Blood (GM12878) 49372398 2098 108029672
chr12 49369642 49370206 ZNF274 GTRD no Blood (GM12878) 49372398 2192 108029673
chr12 49369644 49370225 ZNF274 GTRD no Blood (GM12878) 49372398 2173 108029674
chr12 49369649 49370398 ZNF274 GTRD no Bone Marrow (K562) 49372398 2000 108029675
chr12 49369663 49370154 ZNF274 GTRD no Blood (GM12878) 49372398 2244 108029676
chr12 49369665 49370300 ZNF274 GTRD no Blood (GM12878) 49372398 2098 108029677
chr12 49369671 49370319 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2079 108029678
chr12 49369674 49370610 ZNF143 GTRD no Epithelial (MCF-7) 49372398 1788 108029679
chr12 49369695 49370358 ZNF274 GTRD no Blood (GM12878) 49372398 2040 108029680
chr12 49369701 49370261 MYOD GTRD no Muscle (Myoblast) 49372398 2137 108029681
chr12 49369705 49370272 ZNF274 GTRD no Cervix (HeLa-S3) 49372398 2126 108029682
chr12 49369717 49370295 ZBTB33 GTRD no Lung (A549) 49372398 2103 108029683
chr12 49369718 49370279 ZNF274 GTRD no Blood (GM12878) 49372398 2119 108029684
chr12 49369722 49370221 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2177 108029685
chr12 49369722 49370332 ZNF274 GTRD no Bone Marrow (K562) 49372398 2066 108029686
chr12 49369732 49370359 ZNF274 GTRD no Bone Marrow (K562) 49372398 2039 108029687
chr12 49369736 49370302 ZBTB33 GTRD no Lung (A549) 49372398 2096 108029688
chr12 49369737 49370234 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2164 108029689
chr12 49369750 49370223 ZBTB33 GTRD no Lung (A549) 49372398 2175 108029690
chr12 49369751 49370234 ZNF274 GTRD no Liver (HepG2) 49372398 2164 108029691
chr12 49369751 49370267 ZNF274 GTRD no Blood (GM12878) 49372398 2131 108029692
chr12 49369753 49370208 ZNF274 GTRD no Blood (GM12878) 49372398 2190 108029693
chr12 49369754 49370232 ZNF274 GTRD no Blood (GM12878) 49372398 2166 108029694
chr12 49369756 49370277 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2121 108029695
chr12 49369757 49370113 ZNF274 GTRD no Blood (GM12878) 49372398 2285 108029696
chr12 49369764 49370225 ZNF274 GTRD no Cervix (HeLa-S3) 49372398 2173 108029697
chr12 49369776 49370266 ZNF274 GTRD no Bone Marrow (K562) 49372398 2132 108029698
chr12 49369778 49370122 ZNF274 GTRD no Blood (GM12878) 49372398 2276 108029699
chr12 49369782 49370240 ZNF274 GTRD no Bone Marrow (K562) 49372398 2158 108029700
chr12 49369782 49370383 ZNF274 GTRD no Bone Marrow (K562) 49372398 2015 108029701
chr12 49369787 49370372 ZNF274 GTRD no Blood (GM12878) 49372398 2026 108029702
chr12 49369794 49370257 ZNF274 GTRD no Bone Marrow (K562) 49372398 2141 108029703
chr12 49369798 49370169 ZNF274 GTRD no Bone Marrow (K562) 49372398 2229 108029704
chr12 49369819 49370231 ZNF274 GTRD no Bone Marrow (K562) 49372398 2167 108029705
chr12 49369820 49370171 ZNF274 GTRD no Blood (GM12878) 49372398 2227 108029706
chr12 49369823 49370150 ZNF274 GTRD no Blood (GM12878) 49372398 2248 108029707
chr12 49369827 49370260 ZNF274 GTRD no Blood (GM12878) 49372398 2138 108029708
chr12 49369837 49370132 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2266 108029709
chr12 49369874 49370147 ZNF274 GTRD no Liver (HepG2) 49372398 2251 108029710
chr12 49369897 49370155 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2243 108029711
chr12 49369929 49370128 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2270 108029712
chr12 49369935 49370159 ZNF143 GTRD no Epithelial (MCF-7) 49372398 2239 108029713
chr12 49369957 49370269 ZNF274 GTRD no Liver (HepG2) 49372398 2129 108029714
chr12 49370097 49370118 ZNF263 JASPAR yes 49372398 2280 82399671
chr12 49370098 49370112 TCF7L2 JASPAR yes 49372398 2286 82399672
chr12 49370098 49370113 LEF1 JASPAR yes 49372398 2285 82399673
chr12 49370102 49370123 IRF1 JASPAR yes 49372398 2275 82399674
chr12 49370106 49370121 PRDM1 JASPAR yes 49372398 2277 82399675
chr12 49370151 49370166 MEF2A JASPAR yes 49372398 2232 82399676
chr12 49370152 49370167 MEF2C JASPAR yes 49372398 2231 82399677
chr12 49370155 49370159 YY1 TRANSFAC yes 49372398 2239 82399678
chr12 49370160 49370170 MZF1 JASPAR yes 49372398 2228 82399679
chr12 49370187 49370203 SOX4 JASPAR yes 49372398 2195 82399680
chr12 49370193 49370201 DLX6 JASPAR yes 49372398 2197 82399681
chr12 49370193 49370201 MSX1 JASPAR yes 49372398 2197 82399682
chr12 49370198 49370219 REST JASPAR yes 49372398 2179 82399683
chr12 49370205 49370635 CTCF UCSC Txn Factor no Conserved 49372398 1763 108029715
chr12 49370212 49370224 NHLH1 JASPAR yes 49372398 2174 82399684
chr12 49370213 49370223 MSC JASPAR yes 49372398 2175 82399685
chr12 49370213 49370223 NHLH1 JASPAR yes 49372398 2175 82399686
chr12 49370213 49370223 TFAP4 JASPAR yes 49372398 2175 82399687
chr12 49370213 49370225 TAL1 JASPAR yes 49372398 2173 82399688
chr12 49370223 49370241 RARA JASPAR yes 49372398 2157 82399689
chr12 49370245 49370256 BATF JASPAR yes 49372398 2142 82399690
chr12 49370267 49370557 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 49372398 1841 108029716
chr12 49370268 49370532 RAD21 UCSC Txn Factor no Conserved 49372398 1866 108029717
chr12 49370269 49370513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49372398 1885 108029718
chr12 49370275 49370519 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49372398 1879 108029719
chr12 49370277 49370507 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49372398 1891 108029720
chr12 49370280 49370289 SOX9 JASPAR yes 49372398 2109 82399691
chr12 49370282 49370532 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49372398 1866 108029721
chr12 49370283 49370296 DUXA JASPAR yes 49372398 2102 82399692
chr12 49370283 49370543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49372398 1855 108029722
chr12 49370283 49370553 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49372398 1845 108029723
chr12 49370284 49370295 BATF JASPAR yes 49372398 2103 82399693
chr12 49370284 49370295 DUX4 JASPAR yes 49372398 2103 82399694
chr12 49370289 49370293 YY1 TRANSFAC yes 49372398 2105 82399695
chr12 49370295 49370525 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49372398 1873 108029724
chr12 49370299 49370320 REST JASPAR yes 49372398 2078 82399696
chr12 49370299 49370515 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49372398 1883 108029725
chr12 49370301 49370316 HNF4A JASPAR yes 49372398 2082 82399697
chr12 49370302 49370317 HNF4G JASPAR yes 49372398 2081 82399698
chr12 49370302 49370532 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49372398 1866 108029726
chr12 49370308 49370498 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49372398 1900 108029727
chr12 49370310 49370322 HES5 JASPAR yes 49372398 2076 82399699
chr12 49370311 49370501 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 49372398 1897 108029728
chr12 49370320 49370334 RORA JASPAR yes 49372398 2064 82399700
chr12 49370322 49370337 MEF2A JASPAR yes 49372398 2061 82399701
chr12 49370323 49370338 MEF2C JASPAR yes 49372398 2060 82399702
chr12 49370324 49370336 MEF2A JASPAR yes 49372398 2062 82399703
chr12 49370324 49370336 MEF2B JASPAR yes 49372398 2062 82399704
chr12 49370324 49370336 MEF2D JASPAR yes 49372398 2062 82399705
chr12 49370325 49370335 MEF2A JASPAR yes 49372398 2063 82399706
chr12 49370326 49370330 YY1 TRANSFAC yes 49372398 2068 82399707
chr12 49370345 49370350 TFAP2A TRANSFAC yes 49372398 2048 82399708
chr12 49370345 49370351 MZF1 JASPAR yes 49372398 2047 82399709
chr12 49370362 49370373 E2F6 JASPAR yes 49372398 2025 82399710
chr12 49370372 49370384 INSM1 JASPAR yes 49372398 2014 82399711
chr12 49370377 49370382 SP1 TRANSFAC yes 49372398 2016 82399712
chr12 49370381 49370391 MAX JASPAR yes 49372398 2007 82399713
chr12 49370381 49370401 RREB1 JASPAR yes 49372398 1997 82399714
chr12 49370394 49370399 SP1 TRANSFAC yes 49372398 1999 82399715
chr12 49370395 49370413 ESR2 JASPAR yes 49372398 1985 82399716
chr12 49370397 49370417 ESR1 JASPAR yes 49372398 1981 82399717
chr12 49370398 49370402 LFA1 TRANSFAC yes 49372398 1996 82399718
chr12 49370406 49370409 MYB TRANSFAC yes 49372398 1989 82399719
chr12 49370431 49370437 MZF1 JASPAR yes 49372398 1961 82399720
chr12 49370996 49371396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49372398 1002 108029729
chr12 49371038 49371568 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49372398 830 108029730
chr12 49371052 49371568 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49372398 830 108029731
chr12 49371068 49371378 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49372398 1020 108029732
chr12 49371075 49371093 ESR1 JASPAR yes 49372398 1305 82399721
chr12 49371083 49371343 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49372398 1055 108029733
chr12 49371097 49371497 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49372398 901 108029734
chr12 49371118 49371130 E2F8 JASPAR yes 49372398 1268 82399722
chr12 49371126 49371130 H1TF2 TRANSFAC yes 49372398 1268 82399723
chr12 49371126 49371130 NFE TRANSFAC yes 49372398 1268 82399724
chr12 49371126 49371130 SRF TRANSFAC yes 49372398 1268 82399725
chr12 49371144 49371156 PKNOX2 JASPAR yes 49372398 1242 82399726
chr12 49371144 49371156 TGIF2 JASPAR yes 49372398 1242 82399727
chr12 49371147 49371157 TEAD1 JASPAR yes 49372398 1241 82399728
chr12 49371147 49371157 TEAD4 JASPAR yes 49372398 1241 82399729
chr12 49371147 49371159 TEAD1 JASPAR yes 49372398 1239 82399730
chr12 49371160 49371174 CREB3 JASPAR yes 49372398 1224 82399731
chr12 49371167 49371423 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49372398 975 108029735
chr12 49371171 49371328 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49372398 1070 108029736
chr12 49371171 49371531 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49372398 867 108029737
chr12 49371182 49371197 HNF4G JASPAR yes 49372398 1201 82399732
chr12 49371183 49371197 RXRG JASPAR yes 49372398 1201 82399733
chr12 49371183 49371198 HNF4A JASPAR yes 49372398 1200 82399734
chr12 49371187 49371193 SOX10 JASPAR yes 49372398 1205 82399735
chr12 49371192 49371196 LFA1 TRANSFAC yes 49372398 1202 82399736
chr12 49371204 49371420 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49372398 978 108029738
chr12 49371209 49371439 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49372398 959 108029739
chr12 49371213 49371227 POU4F1 JASPAR yes 49372398 1171 82399737
chr12 49371213 49371229 POU4F2 JASPAR yes 49372398 1169 82399738
chr12 49371218 49371222 YY1 TRANSFAC yes 49372398 1176 82399739
chr12 49371227 49371248 ZNF263 JASPAR yes 49372398 1150 82399740
chr12 49371230 49371420 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 49372398 978 108029740
chr12 49371232 49371242 MAX JASPAR yes 49372398 1156 82399741
chr12 49371233 49371244 NRF1 JASPAR yes 49372398 1154 82399742
chr12 49371239 49371260 ZNF263 JASPAR yes 49372398 1138 82399743
chr12 49371244 49371250 ZNF354C JASPAR yes 49372398 1148 82399744
chr12 49371248 49371268 RREB1 JASPAR yes 49372398 1130 82399745
chr12 49371263 49371273 SMAD3 JASPAR yes 49372398 1125 82399746
SNPs associated with WNT1[ENSG00000125084.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 49926778 rs34224215 C T 551319 Heart 0.250807 2621886
chr12 49365838 rs833841 G A 6560 Spleen 0.193352 2618766
chr12 49201005 rs2453480 A G 171393 Thyroid 0.0951849 2618142
chr12 49678249 rs12322501 C T 302790 Lung 0.19236 2620334
Details of WNT1[ENSG00000125084.7]
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Genomic Location chr12:49372398-49375459[+]
TSS 49372398
Gene Name WNT1
Ensembl ID ENSG00000125084.7
ENTREZID 7471
Uniprot
P04628
Protein Name
Protein Wnt
Proto-oncogene Wnt-1
Expression levels of WNT1[ENSG00000125084.7]
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