EnhancerDB
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Enhancers that regulate SCLY[ENSG00000132330.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 238876433 238876638 vista35445 238969530 92892
VISTA
chr2 238885460 238894099 enh65422 238969530 75431
Stomach Bone (Osteoblast) Lung (PC-9) Heart
chr2 238905265 238909495 enh88571 238969530 60035
Pancreas Blood (T-cell) Stomach
chr2 238916265 238920435 enh48441 238969530 49095
Liver (HepG2) Thymus
chr2 238928053 238932299 enh90052 238969530 37231
Prostate (RWPE1)
chr2 238949645 238953795 enh88572 238969530 15735
Pancreas
chr2 238968617 238969014 vista35446 238969530 516
VISTA
chr2 238984025 238988195 enh76613 238969530 14495
Muscle (A673) Liver (HepG2)
chr2 239017680 239017839 vista35447 238969530 48150
VISTA
chr2 239021185 239025335 enh91340 238969530 51655
Bone Marrow (K562)
chr2 239026565 239030715 enh104960 238969530 57035
Peripheral Blood (MM.1S)
chr2 239034841 239035063 vista35448 238969530 65311
VISTA
chr2 239043985 239048135 enh110991 238969530 74455
Cervix (HeLa-S3)
chr2 239048402 239052998 enh86403 238969530 78872
Colon (HCT116)
chr2 239050654 239050828 vista35449 238969530 81124
VISTA
chr2 239065465 239070055 enh6220 238969530 95935
Blood (Karpas-422)
Transcript facotrs that regulate SCLY[ENSG00000132330.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 238968618 238968638 RREB1 JASPAR yes 238969530 892 22243247
chr2 238968619 238968630 FOXP2 JASPAR yes 238969530 900 22243248
chr2 238968623 238968638 FOXP1 JASPAR yes 238969530 892 22243249
chr2 238968623 238968643 RREB1 JASPAR yes 238969530 887 22243250
chr2 238968625 238968645 RREB1 JASPAR yes 238969530 885 22243251
chr2 238968628 238968640 FOXC2 JASPAR yes 238969530 890 22243252
chr2 238968654 238968660 YY1 JASPAR yes 238969530 870 22243253
chr2 238968678 238968682 YY1 TRANSFAC yes 238969530 848 22243254
chr2 238968708 238968717 VENTX JASPAR yes 238969530 813 22243255
chr2 238968714 238968726 E2F8 JASPAR yes 238969530 804 22243256
chr2 238968717 238968722 SP1 TRANSFAC yes 238969530 808 22243257
chr2 238968736 238968742 ZNF354C JASPAR yes 238969530 788 22243258
chr2 238968737 238968752 FOXA1 JASPAR yes 238969530 778 22243259
chr2 238968737 238968755 TP73 JASPAR yes 238969530 775 22243260
chr2 238968739 238968750 FOXP2 JASPAR yes 238969530 780 22243261
chr2 238968739 238968751 FOXC2 JASPAR yes 238969530 779 22243262
chr2 238968740 238968748 FOXD1 JASPAR yes 238969530 782 22243263
chr2 238968740 238968748 FOXG1 JASPAR yes 238969530 782 22243264
chr2 238968740 238968748 FOXO3 JASPAR yes 238969530 782 22243265
chr2 238968740 238968751 FOXB1 JASPAR yes 238969530 779 22243266
chr2 238968740 238968751 FOXC1 JASPAR yes 238969530 779 22243267
chr2 238968741 238968748 FOXD2 JASPAR yes 238969530 782 22243268
chr2 238968741 238968748 FOXI1 JASPAR yes 238969530 782 22243269
chr2 238968741 238968748 FOXL1 JASPAR yes 238969530 782 22243270
chr2 238968741 238968748 FOXO4 JASPAR yes 238969530 782 22243271
chr2 238968741 238968748 FOXO6 JASPAR yes 238969530 782 22243272
chr2 238968741 238968748 FOXP3 JASPAR yes 238969530 782 22243273
chr2 238968741 238968749 FOXO3 JASPAR yes 238969530 781 22243274
chr2 238968741 238968752 FOXA1 JASPAR yes 238969530 778 22243275
chr2 238968756 238968760 NFE TRANSFAC yes 238969530 770 22243276
chr2 238968756 238968769 SMAD2 JASPAR yes 238969530 761 22243277
chr2 238968780 238968794 IRF7 JASPAR yes 238969530 736 22243278
chr2 238968788 238968799 DUX4 JASPAR yes 238969530 731 22243279
chr2 238968798 238968819 ZNF263 JASPAR yes 238969530 711 22243280
chr2 238968799 238968820 ZNF263 JASPAR yes 238969530 710 22243281
chr2 238968801 238968822 ZNF263 JASPAR yes 238969530 708 22243282
chr2 238968802 238968812 MZF1 JASPAR yes 238969530 718 22243283
chr2 238968802 238968823 ZNF263 JASPAR yes 238969530 707 22243284
chr2 238968805 238968811 SP1 TRANSFAC yes 238969530 719 22243285
chr2 238968814 238968825 E2F6 JASPAR yes 238969530 705 22243286
chr2 238968822 238968840 SRF JASPAR yes 238969530 690 22243287
chr2 238968824 238968840 SRF JASPAR yes 238969530 690 22243288
chr2 238968829 238968837 GATA3 JASPAR yes 238969530 693 22243289
chr2 238968841 238968844 MYB TRANSFAC yes 238969530 686 22243290
chr2 238968862 238968872 GSC2 JASPAR yes 238969530 658 22243291
chr2 238968862 238968872 GSC JASPAR yes 238969530 658 22243292
chr2 238968863 238968871 OTX2 JASPAR yes 238969530 659 22243293
chr2 238968874 238968879 ETS2 TRANSFAC yes 238969530 651 22243294
chr2 238968874 238968885 FLI1 JASPAR yes 238969530 645 22243295
chr2 238968876 238968884 EHF JASPAR yes 238969530 646 22243296
chr2 238968876 238968897 ZNF263 JASPAR yes 238969530 633 22243297
chr2 238968881 238968885 NFE TRANSFAC yes 238969530 645 22243298
chr2 238968895 238968899 H1TF2 TRANSFAC yes 238969530 631 22243299
chr2 238968895 238968899 NFE TRANSFAC yes 238969530 631 22243300
chr2 238968895 238968899 SRF TRANSFAC yes 238969530 631 22243301
chr2 238968899 238968911 HNF1B JASPAR yes 238969530 619 22243302
chr2 238968903 238968907 YY1 TRANSFAC yes 238969530 623 22243303
chr2 238968907 238968910 MYB TRANSFAC yes 238969530 620 22243304
chr2 238968917 238968929 TAL1 JASPAR yes 238969530 601 22243305
chr2 238968925 238968938 DUXA JASPAR yes 238969530 592 22243306
chr2 238968929 238970054 POLR2A UCSC Txn Factor no Conserved 238969530 524 108435959
chr2 238968950 238968955 SP1 TRANSFAC yes 238969530 575 22243307
chr2 238968953 238968962 NKX3-2 JASPAR yes 238969530 568 22243308
chr2 238968955 238969508 PHF8 UCSC Txn Factor no Conserved 238969530 22 108435960
chr2 238968981 238968985 YY1 TRANSFAC yes 238969530 545 22243309
SNPs associated with SCLY[ENSG00000132330.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 239030587 rs35974945 G A 22533 Esophagus 0.000113874 6485311
chr2 239007130 rs62196005 A T 0 Esophagus 0.00264773 6485188
chr2 238848163 rs79679033 G A 121367 Heart 0.0966827 6484539
chr2 238795481 rs61434511 C G 174049 Spleen 0.00508579 6483781
chr2 238540704 rs113574176 G T 428826 Ovary 0.302332 6481744
chr2 238469021 rs13424359 G A 500509 Adrenal 0.0613078 6481032
Details of SCLY[ENSG00000132330.12]
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Genomic Location chr2:238969530-239008054[+]
TSS 238969530
Gene Name SCLY
Ensembl ID ENSG00000132330.12
ENTREZID 51540
Uniprot
Q96I15
Q59FK2
B4DDP9
A0A0A0MQU4
Protein Name
isoform CRA_a
Alternative protein SCLY
Selenocysteine lyase
Selenocysteine lyase
Expression levels of SCLY[ENSG00000132330.12]
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