EnhancerDB
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Enhancers that regulate RPA1[ENSG00000132383.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 1648445 1652595 enh109740 1732996 80401
Stomach
chr17 1666519 1666783 vista23672 1732996 66213
VISTA
chr17 1666985 1672355 enh109741 1732996 60641
Stomach
chr17 1667462 1668045 vista23673 1732996 64951
VISTA
chr17 1680879 1690071 enh16928 1732996 42925
Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Placenta Muscle (Myotube) Uterus Heart
chr17 1691305 1702895 enh4201 1732996 30101
Bone Marrow (K562) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Muscle (A673) Blood (Karpas-422) Uterus Thymus Heart
chr17 1710045 1714195 enh52401 1732996 18801
Large Intestine
chr17 1722245 1729192 enh4202 1732996 3804
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422)
chr17 1749309 1753959 enh62577 1732996 16313
Esophagus
chr17 1762865 1767015 enh65002 1732996 29869
Heart
chr17 1773985 1774184 vista23674 1732996 40989
VISTA
chr17 1805285 1810195 enh4203 1732996 72289
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr17 1810765 1810885 vista23675 1732996 77769
VISTA
chr17 1830397 1837824 enh65003 1732996 97401
Pancreas Stomach Prostate (RWPE1) Heart
Transcript facotrs that regulate RPA1[ENSG00000132383.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 1728023 1728027 NFE TRANSFAC yes 1732996 4969 52704764
chr17 1728044 1728053 RUNX2 JASPAR yes 1732996 4943 52704765
chr17 1728054 1728064 MAX JASPAR yes 1732996 4932 52704766
chr17 1728054 1728065 USF2 JASPAR yes 1732996 4931 52704767
chr17 1728054 1728066 HES5 JASPAR yes 1732996 4930 52704768
chr17 1728054 1728066 HES7 JASPAR yes 1732996 4930 52704769
chr17 1728083 1728096 POU2F2 JASPAR yes 1732996 4900 52704770
chr17 1728083 1728097 POU1F1 JASPAR yes 1732996 4899 52704771
chr17 1728091 1728095 YY1 TRANSFAC yes 1732996 4901 52704772
chr17 1728106 1728119 NFKB1 JASPAR yes 1732996 4877 52704773
chr17 1728106 1728119 NFKB2 JASPAR yes 1732996 4877 52704774
chr17 1728109 1728120 CEBPB JASPAR yes 1732996 4876 52704775
chr17 1728112 1728124 YY1 JASPAR yes 1732996 4872 52704776
chr17 1728132 1728136 H4TF2 TRANSFAC yes 1732996 4860 52704777
chr17 1728163 1728169 NFE2 TRANSFAC yes 1732996 4827 52704778
chr17 1728198 1728209 FOSL2 JASPAR yes 1732996 4787 52704779
chr17 1728217 1728235 MAFF JASPAR yes 1732996 4761 52704780
chr17 1728219 1728234 MAFK JASPAR yes 1732996 4762 52704781
chr17 1728228 1728238 HOXA13 JASPAR yes 1732996 4758 52704782
chr17 1728228 1728238 HOXB13 JASPAR yes 1732996 4758 52704783
chr17 1728228 1728238 HOXD13 JASPAR yes 1732996 4758 52704784
chr17 1728228 1728239 HOXC13 JASPAR yes 1732996 4757 52704785
chr17 1728232 1728236 TEAD2 TRANSFAC yes 1732996 4760 52704786
chr17 1728236 1728249 NFKB1 JASPAR yes 1732996 4747 52704787
chr17 1728236 1728249 NFKB2 JASPAR yes 1732996 4747 52704788
chr17 1728237 1728247 NFKB1 JASPAR yes 1732996 4749 52704789
chr17 1728237 1728247 RELA JASPAR yes 1732996 4749 52704790
chr17 1728237 1728247 REL JASPAR yes 1732996 4749 52704791
chr17 1728237 1728248 NFKB1 JASPAR yes 1732996 4748 52704792
chr17 1728238 1728249 NFKB1 JASPAR yes 1732996 4747 52704793
chr17 1728249 1728255 TCF4 TRANSFAC yes 1732996 4741 52704794
chr17 1728249 1728267 MAFF JASPAR yes 1732996 4729 52704795
chr17 1728250 1728265 MAFK JASPAR yes 1732996 4731 52704796
chr17 1728254 1728265 NRL JASPAR yes 1732996 4731 52704797
chr17 1728264 1728275 FLI1 JASPAR yes 1732996 4721 52704798
chr17 1728266 1728274 EHF JASPAR yes 1732996 4722 52704799
chr17 1728293 1728314 ZNF263 JASPAR yes 1732996 4682 52704800
chr17 1728296 1728317 ZNF263 JASPAR yes 1732996 4679 52704801
chr17 1728300 1728305 ETS2 TRANSFAC yes 1732996 4691 52704802
chr17 1728339 1728359 TBX19 JASPAR yes 1732996 4637 52704803
chr17 1728341 1728357 T JASPAR yes 1732996 4639 52704804
chr17 1728351 1728362 JUNB JASPAR yes 1732996 4634 52704805
chr17 1728352 1728363 FOSL1 JASPAR yes 1732996 4633 52704806
chr17 1728354 1728365 BATF JASPAR yes 1732996 4631 52704807
chr17 1728357 1728367 GSX2 JASPAR yes 1732996 4629 52704808
chr17 1728357 1728367 HESX1 JASPAR yes 1732996 4629 52704809
chr17 1728357 1728367 LBX2 JASPAR yes 1732996 4629 52704810
chr17 1728357 1728367 MIXL1 JASPAR yes 1732996 4629 52704811
chr17 1728357 1728367 MNX1 JASPAR yes 1732996 4629 52704812
chr17 1728357 1728367 RAX JASPAR yes 1732996 4629 52704813
chr17 1728358 1728366 ISX JASPAR yes 1732996 4630 52704814
chr17 1728358 1728366 LHX9 JASPAR yes 1732996 4630 52704815
chr17 1728358 1728366 LMX1B JASPAR yes 1732996 4630 52704816
chr17 1728358 1728366 PRRX1 JASPAR yes 1732996 4630 52704817
chr17 1728358 1728366 RAX2 JASPAR yes 1732996 4630 52704818
chr17 1728358 1728366 SHOX JASPAR yes 1732996 4630 52704819
chr17 1728358 1728366 UNCX JASPAR yes 1732996 4630 52704820
chr17 1728371 1728386 FOXP1 JASPAR yes 1732996 4610 52704821
chr17 1728378 1728382 TEAD2 TRANSFAC yes 1732996 4614 52704822
chr17 1728378 1728383 TBP TRANSFAC yes 1732996 4613 52704823
chr17 1728378 1728384 TMF TRANSFAC yes 1732996 4612 52704824
chr17 1728399 1728403 YY1 TRANSFAC yes 1732996 4593 52704825
chr17 1728428 1728431 MYB TRANSFAC yes 1732996 4565 52704826
chr17 1728440 1728451 PROP1 JASPAR yes 1732996 4545 52704827
chr17 1728443 1728455 MEF2A JASPAR yes 1732996 4541 52704828
chr17 1728444 1728458 POU1F1 JASPAR yes 1732996 4538 52704829
chr17 1728445 1728457 POU3F1 JASPAR yes 1732996 4539 52704830
chr17 1728445 1728457 POU3F2 JASPAR yes 1732996 4539 52704831
chr17 1728454 1728457 MYB TRANSFAC yes 1732996 4539 52704832
chr17 1728463 1728467 YY1 TRANSFAC yes 1732996 4529 52704833
chr17 1728476 1728481 TFAP2A TRANSFAC yes 1732996 4515 52704834
chr17 1728476 1728482 MZF1 JASPAR yes 1732996 4514 52704835
chr17 1728484 1728497 ATF4 JASPAR yes 1732996 4499 52704836
chr17 1728496 1728500 YY1 TRANSFAC yes 1732996 4496 52704837
chr17 1728519 1728529 FIGLA JASPAR yes 1732996 4467 52704838
chr17 1728521 1728526 USF2 TRANSFAC yes 1732996 4470 52704839
chr17 1728525 1728532 NFATC2 JASPAR yes 1732996 4464 52704840
chr17 1728526 1728547 IRF1 JASPAR yes 1732996 4449 52704841
chr17 1728530 1728545 PRDM1 JASPAR yes 1732996 4451 52704842
chr17 1728532 1728542 TBX21 JASPAR yes 1732996 4454 52704843
chr17 1728544 1728549 ETS2 TRANSFAC yes 1732996 4447 52704844
chr17 1728545 1728562 ZNF410 JASPAR yes 1732996 4434 52704845
chr17 1728548 1728564 ZNF143 JASPAR yes 1732996 4432 52704846
chr17 1728560 1728574 ONECUT1 JASPAR yes 1732996 4422 52704847
chr17 1728560 1728574 ONECUT2 JASPAR yes 1732996 4422 52704848
chr17 1728560 1728574 ONECUT3 JASPAR yes 1732996 4422 52704849
chr17 1728563 1728573 PAX3 JASPAR yes 1732996 4423 52704850
chr17 1728563 1728573 PAX7 JASPAR yes 1732996 4423 52704851
chr17 1728576 1728587 FOXB1 JASPAR yes 1732996 4409 52704852
chr17 1728579 1728587 FOXL1 JASPAR yes 1732996 4409 52704853
chr17 1728590 1728602 TEF JASPAR yes 1732996 4394 52704854
chr17 1728592 1728595 MYB TRANSFAC yes 1732996 4401 52704855
chr17 1728620 1728624 YY1 TRANSFAC yes 1732996 4372 52704856
chr17 1728633 1728644 RUNX1 JASPAR yes 1732996 4352 52704857
chr17 1728643 1728655 YY1 JASPAR yes 1732996 4341 52704858
chr17 1728649 1728655 PEA3 TRANSFAC yes 1732996 4341 52704859
chr17 1728649 1728670 ZNF263 JASPAR yes 1732996 4326 52704860
chr17 1728664 1728685 ZNF263 JASPAR yes 1732996 4311 52704861
chr17 1728665 1728675 GSC2 JASPAR yes 1732996 4321 52704862
chr17 1728665 1728675 GSC JASPAR yes 1732996 4321 52704863
chr17 1728666 1728674 OTX2 JASPAR yes 1732996 4322 52704864
chr17 1728679 1728694 FOXP1 JASPAR yes 1732996 4302 52704865
chr17 1728685 1728691 TBP TRANSFAC yes 1732996 4305 52704866
chr17 1728696 1728711 FOXP1 JASPAR yes 1732996 4285 52704867
chr17 1728701 1728710 SRY JASPAR yes 1732996 4286 52704868
chr17 1728703 1728712 SOX9 JASPAR yes 1732996 4284 52704869
chr17 1728704 1728720 SOX4 JASPAR yes 1732996 4276 52704870
chr17 1728704 1728720 SOX8 JASPAR yes 1732996 4276 52704871
chr17 1728713 1728717 YY1 TRANSFAC yes 1732996 4279 52704872
chr17 1728746 1728756 MAX JASPAR yes 1732996 4240 52704873
chr17 1728746 1728757 USF2 JASPAR yes 1732996 4239 52704874
chr17 1728746 1728758 HES5 JASPAR yes 1732996 4238 52704875
chr17 1728746 1728758 HES7 JASPAR yes 1732996 4238 52704876
chr17 1728746 1728758 PKNOX1 JASPAR yes 1732996 4238 52704877
chr17 1728746 1728758 PKNOX2 JASPAR yes 1732996 4238 52704878
chr17 1728746 1728758 TGIF1 JASPAR yes 1732996 4238 52704879
chr17 1728746 1728758 TGIF2 JASPAR yes 1732996 4238 52704880
chr17 1728761 1728779 IRF2 JASPAR yes 1732996 4217 52704881
chr17 1728771 1728775 YY1 TRANSFAC yes 1732996 4221 52704882
chr17 1728789 1728801 IRF1 JASPAR yes 1732996 4195 52704883
chr17 1728789 1728810 IRF1 JASPAR yes 1732996 4186 52704884
chr17 1728790 1728794 NFE TRANSFAC yes 1732996 4202 52704885
chr17 1728791 1728812 IRF1 JASPAR yes 1732996 4184 52704886
chr17 1728794 1728798 YY1 TRANSFAC yes 1732996 4198 52704887
chr17 1728795 1728816 IRF1 JASPAR yes 1732996 4180 52704888
chr17 1728797 1728812 PRDM1 JASPAR yes 1732996 4184 52704889
chr17 1728797 1728812 STAT2 JASPAR yes 1732996 4184 52704890
chr17 1728798 1728812 SPIC JASPAR yes 1732996 4184 52704891
chr17 1728798 1728812 STAT1 JASPAR yes 1732996 4184 52704892
chr17 1728799 1728820 IRF1 JASPAR yes 1732996 4176 52704893
chr17 1728800 1728815 FOXP1 JASPAR yes 1732996 4181 52704894
chr17 1728800 1728821 IRF1 JASPAR yes 1732996 4175 52704895
chr17 1728801 1728822 IRF1 JASPAR yes 1732996 4174 52704896
chr17 1728802 1728817 FOXP1 JASPAR yes 1732996 4179 52704897
chr17 1728802 1728823 IRF1 JASPAR yes 1732996 4173 52704898
chr17 1728803 1728824 IRF1 JASPAR yes 1732996 4172 52704899
chr17 1728804 1728819 FOXP1 JASPAR yes 1732996 4177 52704900
chr17 1728805 1728820 FOXP1 JASPAR yes 1732996 4176 52704901
chr17 1728806 1728821 FOXP1 JASPAR yes 1732996 4175 52704902
chr17 1728807 1728822 FOXP1 JASPAR yes 1732996 4174 52704903
chr17 1728808 1728823 FOXP1 JASPAR yes 1732996 4173 52704904
chr17 1728809 1728824 FOXP1 JASPAR yes 1732996 4172 52704905
chr17 1728810 1728825 FOXP1 JASPAR yes 1732996 4171 52704906
chr17 1728811 1728826 FOXP1 JASPAR yes 1732996 4170 52704907
chr17 1728839 1728843 NFE TRANSFAC yes 1732996 4153 52704908
chr17 1728869 1728888 PAX5 JASPAR yes 1732996 4108 52704909
chr17 1728890 1728904 GLIS3 JASPAR yes 1732996 4092 52704910
chr17 1728897 1728915 ESR2 JASPAR yes 1732996 4081 52704911
chr17 1728904 1728922 RARA JASPAR yes 1732996 4074 52704912
chr17 1728910 1728921 E2F6 JASPAR yes 1732996 4075 52704913
chr17 1728913 1728921 TBX15 JASPAR yes 1732996 4075 52704914
chr17 1728946 1728956 MAX JASPAR yes 1732996 4040 52704915
chr17 1728946 1728957 USF2 JASPAR yes 1732996 4039 52704916
chr17 1728946 1728958 HES5 JASPAR yes 1732996 4038 52704917
chr17 1728946 1728958 HES7 JASPAR yes 1732996 4038 52704918
chr17 1728957 1728976 PAX5 JASPAR yes 1732996 4020 52704919
chr17 1728966 1728981 HNF1A JASPAR yes 1732996 4015 52704920
chr17 1728967 1728980 HNF1B JASPAR yes 1732996 4016 52704921
chr17 1728978 1728989 PROP1 JASPAR yes 1732996 4007 52704922
chr17 1728980 1728995 FOXP1 JASPAR yes 1732996 4001 52704923
chr17 1728981 1728992 FOXP2 JASPAR yes 1732996 4004 52704924
chr17 1728981 1728993 FOXC2 JASPAR yes 1732996 4003 52704925
chr17 1728981 1728993 MEF2A JASPAR yes 1732996 4003 52704926
chr17 1728982 1728990 FOXG1 JASPAR yes 1732996 4006 52704927
chr17 1728982 1728990 FOXO3 JASPAR yes 1732996 4006 52704928
chr17 1728996 1729006 RELA JASPAR yes 1732996 3990 52704929
chr17 1729041 1729054 SCRT2 JASPAR yes 1732996 3942 52704930
chr17 1729041 1729055 RXRB JASPAR yes 1732996 3941 52704931
chr17 1729041 1729055 RXRG JASPAR yes 1732996 3941 52704932
chr17 1729042 1729056 PLAG1 JASPAR yes 1732996 3940 52704933
chr17 1729057 1729071 NR2F1 JASPAR yes 1732996 3925 52704934
chr17 1729076 1729087 FOSL2 JASPAR yes 1732996 3909 52704935
chr17 1729156 1729161 ETS2 TRANSFAC yes 1732996 3835 52704936
SNPs associated with RPA1[ENSG00000132383.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 944317 rs113088615 G A 788679 Esophagus 0.0684694 4688936
chr17 1673405 rs12603825 G A,T 59591 Esophagus 2.33395e-08 4696281
chr17 1733139 rs17338501 C T 0 Esophagus 1.07998e-06 4696783
chr17 1733331 rs17291745 C G,T 0 Pancreas 0.000133002 4696790
chr17 833044 rs397693832 T TA 899952 Spleen 0.179946 4687265
chr17 1695421 rs111356918 C G 37575 Ovary 0.174377 4696506
chr17 1710712 rs397857824 G GC 22284 Liver 0.136127 4696616
chr17 1728880 rs9916115 G A 4116 Stomach 2.6487e-05 4696769
Details of RPA1[ENSG00000132383.7]
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Genomic Location chr17:1732996-1803376[+]
TSS 1732996
Gene Name RPA1
Ensembl ID ENSG00000132383.7
ENTREZID 6117
Uniprot
P27694
Protein Name
Replication protein A 70 kDa DNA-binding subunit
Expression levels of RPA1[ENSG00000132383.7]
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