EnhancerDB
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Enhancers that regulate LYVE1[ENSG00000133800.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 10541440 10541628 vista9621 10633236 91608
VISTA
chr11 10542545 10552095 enh28584 10633236 81141
Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Lung (PC-9) Uterus Stomach
chr11 10545162 10545253 vista9622 10633236 87983
VISTA
chr11 10549004 10549441 vista9623 10633236 83795
VISTA
chr11 10570131 10575695 enh28585 10633236 57541
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Muscle (A673) Colon (HCT116) Lung (PC-9)
chr11 10600225 10612755 enh13759 10633236 20481
Bone Marrow (K562) Prostate (PC-3) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
chr11 10614045 10614168 vista9624 10633236 19068
VISTA
chr11 10614105 10621835 enh13760 10633236 11401
Placenta Stomach
chr11 10618515 10618559 vista9625 10633236 14677
VISTA
chr11 10619660 10619757 vista9626 10633236 13479
VISTA
chr11 10623985 10628235 enh28586 10633236 5001
Astrocyte Thymus Heart
chr11 10627707 10627864 vista9627 10633236 5372
VISTA
chr11 10633912 10633952 vista9628 10633236 676
VISTA
chr11 10634601 10634999 vista9629 10633236 1365
VISTA
chr11 10638805 10642955 enh98781 10633236 5569
Uterus
chr11 10644942 10645095 vista9630 10633236 11706
VISTA
chr11 10657898 10693746 enh13761 10633236 24662
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr11 10659915 10660098 vista9631 10633236 26679
VISTA
chr11 10681207 10681687 vista9632 10633236 47971
VISTA
chr11 10694122 10698955 enh43486 10633236 60886
Stomach Muscle (Myotube) Uterus Heart
chr11 10721650 10727475 enh86059 10633236 88414
Colon (HCT116) Brain (SK-N-MC)
chr11 10728925 10733535 enh109478 10633236 95689
Stomach
Transcript facotrs that regulate LYVE1[ENSG00000133800.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 10627138 10628990 TCF7L2 GTRD no Colon (HCT116) 10633236 4246 107957459
chr11 10627796 10628902 ZNF274 GTRD no Blood (GM12878) 10633236 4334 107957472
chr11 10633371 10634031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 10633236 135 107957473
chr11 10633570 10634230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 10633236 334 107957474
chr11 10633914 10633924 NFATC3 JASPAR yes 10633236 678 114040485
chr11 10633916 10633922 ETS1 JASPAR yes 10633236 680 114040486
chr11 10633922 10633937 STAT2 JASPAR yes 10633236 686 114040487
chr11 10633933 10633937 H1TF2 TRANSFAC yes 10633236 697 114040488
chr11 10633933 10633937 NFE TRANSFAC yes 10633236 697 114040489
chr11 10633933 10633937 SRF TRANSFAC yes 10633236 697 114040490
chr11 10634602 10634616 GATA2 JASPAR yes 10633236 1366 114040491
chr11 10634604 10634612 GATA3 JASPAR yes 10633236 1368 114040492
chr11 10634627 10634644 RARA JASPAR yes 10633236 1391 114040493
chr11 10634627 10634644 RXRA JASPAR yes 10633236 1391 114040494
chr11 10634636 10634647 NFE2 JASPAR yes 10633236 1400 114040495
chr11 10634637 10634648 FOSL2 JASPAR yes 10633236 1401 114040496
chr11 10634651 10634655 YY1 TRANSFAC yes 10633236 1415 114040497
chr11 10634685 10634700 HNF4G JASPAR yes 10633236 1449 114040498
chr11 10634690 10634696 SOX10 JASPAR yes 10633236 1454 114040499
chr11 10634693 10634713 TP53 JASPAR yes 10633236 1457 114040500
chr11 10634702 10634708 TCF1 TRANSFAC yes 10633236 1466 114040501
chr11 10634710 10634714 TEAD2 TRANSFAC yes 10633236 1474 114040502
chr11 10634712 10634715 MYB TRANSFAC yes 10633236 1476 114040503
chr11 10634735 10634747 E2F8 JASPAR yes 10633236 1499 114040504
chr11 10634736 10634751 PRDM1 JASPAR yes 10633236 1500 114040505
chr11 10634737 10634747 MZF1 JASPAR yes 10633236 1501 114040506
chr11 10634737 10634752 NR2C2 JASPAR yes 10633236 1501 114040507
chr11 10634738 10634752 RXRB JASPAR yes 10633236 1502 114040508
chr11 10634738 10634752 RXRG JASPAR yes 10633236 1502 114040509
chr11 10634738 10634758 PPARG JASPAR yes 10633236 1502 114040510
chr11 10634762 10634769 MEIS1 JASPAR yes 10633236 1526 114040511
chr11 10634762 10634770 MEIS2 JASPAR yes 10633236 1526 114040512
chr11 10634781 10634787 TBP TRANSFAC yes 10633236 1545 114040513
chr11 10634788 10634800 POU2F1 JASPAR yes 10633236 1552 114040514
chr11 10634790 10634794 YY1 TRANSFAC yes 10633236 1554 114040515
chr11 10634790 10634799 POU5F1B JASPAR yes 10633236 1554 114040516
chr11 10634804 10634819 FOXP1 JASPAR yes 10633236 1568 114040517
chr11 10634804 10634825 IRF1 JASPAR yes 10633236 1568 114040518
chr11 10634805 10634820 FOXP1 JASPAR yes 10633236 1569 114040519
chr11 10634806 10634821 FOXP1 JASPAR yes 10633236 1570 114040520
chr11 10634807 10634822 FOXP1 JASPAR yes 10633236 1571 114040521
chr11 10634808 10634823 FOXP1 JASPAR yes 10633236 1572 114040522
chr11 10634809 10634824 FOXP1 JASPAR yes 10633236 1573 114040523
chr11 10634809 10634830 IRF1 JASPAR yes 10633236 1573 114040524
chr11 10634810 10634825 FOXP1 JASPAR yes 10633236 1574 114040525
chr11 10634810 10634831 IRF1 JASPAR yes 10633236 1574 114040526
chr11 10634811 10634826 FOXP1 JASPAR yes 10633236 1575 114040527
chr11 10634814 10634829 STAT2 JASPAR yes 10633236 1578 114040528
chr11 10634840 10634854 IRF7 JASPAR yes 10633236 1604 114040529
chr11 10634868 10634880 NHLH1 JASPAR yes 10633236 1632 114040530
chr11 10634869 10634879 MSC JASPAR yes 10633236 1633 114040531
chr11 10634869 10634879 TFAP4 JASPAR yes 10633236 1633 114040532
chr11 10634876 10634880 H4TF2 TRANSFAC yes 10633236 1640 114040533
chr11 10634893 10634896 MYB TRANSFAC yes 10633236 1657 114040534
chr11 10634895 10634907 MEF2B JASPAR yes 10633236 1659 114040535
chr11 10634929 10634944 FOXP1 JASPAR yes 10633236 1693 114040536
chr11 10634930 10634941 FOXA1 JASPAR yes 10633236 1694 114040537
chr11 10634931 10634936 ETS2 TRANSFAC yes 10633236 1695 114040538
chr11 10634932 10634943 FOXP2 JASPAR yes 10633236 1696 114040539
chr11 10634933 10634941 FOXO3 JASPAR yes 10633236 1697 114040540
chr11 10634943 10635812 ZNF274 GTRD no Bone Marrow (K562) 10633236 1707 107957475
chr11 10634953 10634964 NFIL3 JASPAR yes 10633236 1717 114040541
chr11 10634958 10634961 MYB TRANSFAC yes 10633236 1722 114040542
chr11 10634958 10634968 RUNX3 JASPAR yes 10633236 1722 114040543
chr11 10634958 10634969 RUNX1 JASPAR yes 10633236 1722 114040544
chr11 10634963 10634978 AR JASPAR yes 10633236 1727 114040545
chr11 10634970 10634974 NFE TRANSFAC yes 10633236 1734 114040546
SNPs associated with LYVE1[ENSG00000133800.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 11540132 rs56280704 C A,T 906896 Esophagus 0.271706 1849508
chr11 10574595 rs72861030 T A 3918 Heart 0.0225444 1841851
chr11 10999162 rs10770151 G A 365926 Spleen 0.405281 1844937
chr11 11365617 rs1994398 C G 732381 Uterus 0.317078 1847870
chr11 10883149 rs1980286 A G 249913 Liver 0.190651 1844034
chr11 11287806 rs10831561 C T 654570 Lung 0.0867901 1847286
chr11 11573407 rs4282974 C T 940171 Stomach 0.0975161 1849906
Details of LYVE1[ENSG00000133800.4]
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Genomic Location chr11:10578513-10633236[-]
TSS 10633236
Gene Name LYVE1
Ensembl ID ENSG00000133800.4
ENTREZID 10894
Uniprot
Q9Y5Y7
B2R672
Protein Name
Lymphatic vessel endothelial hyaluronic acid receptor 1
Expression levels of LYVE1[ENSG00000133800.4]
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