EnhancerDB
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Enhancers that regulate CDH11[ENSG00000140937.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 65055585 65061075 enh31855 65160015 98940
Astrocyte Spleen
chr16 65076734 65081086 enh31856 65160015 78929
Astrocyte Muscle (Myotube) Bone (Osteoblast) Ovary
chr16 65086465 65092695 enh31857 65160015 67320
Astrocyte
chr16 65093564 65093880 vista22727 65160015 66135
VISTA
chr16 65093990 65098088 enh102543 65160015 61927
Bone (Osteoblast)
chr16 65100005 65105341 enh31858 65160015 54674
Prostate (PC-3) Brain (SK-N-MC) Ovary Prostate (RWPE1) Astrocyte Muscle (A673) Uterus
chr16 65103847 65103999 vista22728 65160015 56016
VISTA
chr16 65105283 65105525 vista22729 65160015 54490
VISTA
chr16 65122805 65126955 enh112480 65160015 33060
Brain (SK-N-MC)
chr16 65142745 65147515 enh81127 65160015 12500
Prostate (PC-3)
chr16 65150005 65155475 enh99341 65160015 4540
Uterus
chr16 65153548 65154160 vista22730 65160015 5855
VISTA
chr16 65154285 65154635 vista22731 65160015 5380
VISTA
chr16 65182685 65186835 enh104258 65160015 22670
Peripheral Blood (MM.1S)
chr16 65208745 65214295 enh31859 65160015 48730
Astrocyte
chr16 65228065 65232835 enh96700 65160015 68050
Brain (SK-N-MC) Epithelial (MCF-7)
chr16 65255245 65265515 enh69160 65160015 95230
Neural Stem Cells (H9)
Transcript facotrs that regulate CDH11[ENSG00000140937.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 65154633 65155543 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 65160015 4472 108199320
chr16 65155017 65155035 NFYA JASPAR yes 65160015 4980 11043881
chr16 65155021 65155025 H1TF2 TRANSFAC yes 65160015 4990 11043882
chr16 65155021 65155025 NFE TRANSFAC yes 65160015 4990 11043883
chr16 65155021 65155025 SRF TRANSFAC yes 65160015 4990 11043884
chr16 65155080 65155085 SP1 TRANSFAC yes 65160015 4930 11043885
chr16 65155096 65155107 E2F1 JASPAR yes 65160015 4908 11043886
chr16 65155154 65155160 NFE2 TRANSFAC yes 65160015 4855 11043887
chr16 65155158 65155179 REST JASPAR yes 65160015 4836 11043888
chr16 65155175 65155187 INSM1 JASPAR yes 65160015 4828 11043889
chr16 65155200 65155209 THAP1 JASPAR yes 65160015 4806 11043890
chr16 65155203 65155207 LFA1 TRANSFAC yes 65160015 4808 11043891
chr16 65155213 65155219 ETS1 JASPAR yes 65160015 4796 11043892
chr16 65155213 65155219 SPI1 JASPAR yes 65160015 4796 11043893
chr16 65155213 65155223 ELK1 JASPAR yes 65160015 4792 11043894
chr16 65155225 65155235 REL JASPAR yes 65160015 4780 11043895
chr16 65155226 65155241 STAT2 JASPAR yes 65160015 4774 11043896
chr16 65155227 65155241 STAT1 JASPAR yes 65160015 4774 11043897
chr16 65155228 65155238 NFATC3 JASPAR yes 65160015 4777 11043898
chr16 65155228 65155239 ETV2 JASPAR yes 65160015 4776 11043899
chr16 65155230 65155236 ETS1 JASPAR yes 65160015 4779 11043900
chr16 65155234 65155251 BCL6B JASPAR yes 65160015 4764 11043901
chr16 65155235 65155255 TP53 JASPAR yes 65160015 4760 11043902
chr16 65155242 65155252 REL JASPAR yes 65160015 4763 11043903
chr16 65155277 65155286 TFAP2A JASPAR yes 65160015 4729 11043904
chr16 65155315 65155336 REST JASPAR yes 65160015 4679 11043905
chr16 65155316 65155335 REST JASPAR yes 65160015 4680 11043906
chr16 65155335 65155339 ESR1 TRANSFAC yes 65160015 4676 11043907
chr16 65155351 65155356 TFAP2A TRANSFAC yes 65160015 4659 11043908
chr16 65155351 65155357 MZF1 JASPAR yes 65160015 4658 11043909
chr16 65155353 65155358 ETS2 TRANSFAC yes 65160015 4657 11043910
chr16 65155371 65155376 SP1 TRANSFAC yes 65160015 4639 11043911
chr16 65155371 65155380 HIC2 JASPAR yes 65160015 4635 11043912
chr16 65155374 65155378 LFA1 TRANSFAC yes 65160015 4637 11043913
chr16 65155395 65155409 EBF1 JASPAR yes 65160015 4606 11043914
chr16 65155396 65155407 EBF1 JASPAR yes 65160015 4608 11043915
chr16 65155397 65155403 MZF1 JASPAR yes 65160015 4612 11043916
chr16 65155454 65155466 INSM1 JASPAR yes 65160015 4549 11043917
SNPs associated with CDH11[ENSG00000140937.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 65310506 rs12444363 A C 150491 Esophagus 0.00110884 4485727
chr16 65976375 rs78150890 T C 816360 Esophagus 0.249457 4489194
chr16 65274718 rs1423792 C T 114703 Heart 4.95331e-06 4485569
chr16 65678329 rs117047936 C T 518314 Spleen 0.968957 4487349
chr16 65904595 rs148990104 G T 744580 Ovary 0.417935 4488746
chr16 64916501 rs147052512 C T 61155 Liver 0.291991 4484434
Details of CDH11[ENSG00000140937.9]
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Genomic Location chr16:64977656-65160015[-]
TSS 65160015
Gene Name CDH11
Ensembl ID ENSG00000140937.9
ENTREZID 1009
Uniprot
H3BUU9
P55287
Protein Name
OB-cadherin
type 2
Cadherin 11
Cadherin-11
Expression levels of CDH11[ENSG00000140937.9]
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