EnhancerDB
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Enhancers that regulate SLC13A5[ENSG00000141485.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 6538780 6542862 enh102556 6616886 74024
Bone (Osteoblast)
chr17 6541812 6541912 vista23838 6616886 74974
VISTA
chr17 6542489 6542952 vista23839 6616886 73934
VISTA
chr17 6552025 6577412 enh4228 6616886 39474
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr17 6577465 6587358 enh52411 6616886 29528
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Large Intestine Epithelial (MCF-7)
chr17 6614362 6614643 vista23840 6616886 2243
VISTA
chr17 6655808 6656203 vista23841 6616886 38922
VISTA
chr17 6656419 6656747 vista23842 6616886 39533
VISTA
chr17 6660646 6660876 vista23843 6616886 43760
VISTA
Transcript facotrs that regulate SLC13A5[ENSG00000141485.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 6614327 6614703 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 2183 108233442
chr17 6614366 6614656 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 2230 108233443
chr17 6614404 6614410 NFIC JASPAR yes 6616886 2476 21190153
chr17 6614408 6614632 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 2254 108233444
chr17 6614410 6614428 ESR2 JASPAR yes 6616886 2458 21190154
chr17 6614410 6614746 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 2140 108233445
chr17 6614411 6614426 ESR2 JASPAR yes 6616886 2460 21190155
chr17 6614411 6614431 ESR1 JASPAR yes 6616886 2455 21190156
chr17 6614417 6614707 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 2179 108233446
chr17 6614420 6614437 RARA JASPAR yes 6616886 2449 21190157
chr17 6614420 6614437 RXRA JASPAR yes 6616886 2449 21190158
chr17 6614426 6614445 CTCF JASPAR yes 6616886 2441 21190159
chr17 6614463 6614469 NFIC JASPAR yes 6616886 2417 21190160
chr17 6614469 6614473 H4TF2 TRANSFAC yes 6616886 2413 21190161
chr17 6614474 6614741 ZNF143 GTRD no Epithelial (MCF-7) 6616886 2145 108233447
chr17 6614493 6614505 NHLH1 JASPAR yes 6616886 2381 21190162
chr17 6614494 6614504 NHLH1 JASPAR yes 6616886 2382 21190163
chr17 6614524 6614534 RELA JASPAR yes 6616886 2352 21190164
chr17 6614529 6614965 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 6616886 1921 108233448
chr17 6614530 6614535 ETS2 TRANSFAC yes 6616886 2351 21190165
chr17 6614532 6614543 CEBPB JASPAR yes 6616886 2343 21190166
chr17 6614533 6614543 CEBPB JASPAR yes 6616886 2343 21190167
chr17 6614533 6614543 CEBPD JASPAR yes 6616886 2343 21190168
chr17 6614533 6614543 CEBPE JASPAR yes 6616886 2343 21190169
chr17 6614533 6614543 CEBPG JASPAR yes 6616886 2343 21190170
chr17 6614533 6614544 CEBPA JASPAR yes 6616886 2342 21190171
chr17 6614536 6614545 SOX9 JASPAR yes 6616886 2341 21190172
chr17 6614536 6614551 ZIC3 JASPAR yes 6616886 2335 21190173
chr17 6614536 6614551 ZIC4 JASPAR yes 6616886 2335 21190174
chr17 6614537 6614551 ZIC1 JASPAR yes 6616886 2335 21190175
chr17 6614544 6614549 SP1 TRANSFAC yes 6616886 2337 21190176
chr17 6614557 6614577 ESR1 JASPAR yes 6616886 2309 21190177
chr17 6614558 6614563 SP1 TRANSFAC yes 6616886 2323 21190178
chr17 6614560 6614578 ESR2 JASPAR yes 6616886 2308 21190179
chr17 6614561 6614571 SP1 JASPAR yes 6616886 2315 21190180
chr17 6614561 6614579 ESR1 JASPAR yes 6616886 2307 21190181
chr17 6614562 6614572 SP1 JASPAR yes 6616886 2314 21190182
chr17 6614562 6614577 ESR2 JASPAR yes 6616886 2309 21190183
chr17 6614562 6614582 ESR1 JASPAR yes 6616886 2304 21190184
chr17 6614563 6614567 LFA1 TRANSFAC yes 6616886 2319 21190185
chr17 6614569 6614587 SRF JASPAR yes 6616886 2299 21190186
chr17 6614575 6614589 SPIC JASPAR yes 6616886 2297 21190187
chr17 6614581 6614602 IRF1 JASPAR yes 6616886 2284 21190188
chr17 6614584 6614598 IRF7 JASPAR yes 6616886 2288 21190189
chr17 6614587 6614602 FOXP1 JASPAR yes 6616886 2284 21190190
chr17 6614591 6615155 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 1731 108233449
chr17 6614592 6615136 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 6616886 1750 108233450
chr17 6614594 6614608 SPI1 JASPAR yes 6616886 2278 21190191
chr17 6614601 6614616 HNF4G JASPAR yes 6616886 2270 21190192
chr17 6614602 6614617 HNF4A JASPAR yes 6616886 2269 21190193
chr17 6614605 6614621 SOX8 JASPAR yes 6616886 2265 21190194
chr17 6614608 6614623 HNF4G JASPAR yes 6616886 2263 21190195
chr17 6614609 6614624 HNF4A JASPAR yes 6616886 2262 21190196
chr17 6614610 6614614 H4TF2 TRANSFAC yes 6616886 2272 21190197
chr17 6614617 6614621 H4TF2 TRANSFAC yes 6616886 2265 21190198
chr17 6614621 6614631 SREBF1 JASPAR yes 6616886 2255 21190199
chr17 6614624 6614634 SP1 JASPAR yes 6616886 2252 21190200
chr17 6614630 6614636 SP1 TRANSFAC yes 6616886 2250 21190201
SNPs associated with SLC13A5[ENSG00000141485.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 6572949 rs594925 G A 15083 Esophagus 2.15656e-11 4725313
chr17 6453740 rs12603170 G A 134292 Ovary 0.466332 4724526
chr17 7179477 rs56262983 A AAAAT 562591 Uterus 0.365733 4729057
chr17 6286237 rs8065701 A G 301795 Liver 0.28976 4723926
chr17 7037900 rs62061397 C T 421014 Lung 0.0459013 4728190
Details of SLC13A5[ENSG00000141485.11]
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Genomic Location chr17:6588032-6616886[-]
TSS 6616886
Gene Name SLC13A5
Ensembl ID ENSG00000141485.11
ENTREZID 284111
Uniprot
Q86YT5
Q68D44
Protein Name
Solute carrier family 13 member 5
Expression levels of SLC13A5[ENSG00000141485.11]
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