EnhancerDB
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Enhancers that regulate AFF3[ENSG00000144218.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 100667225 100679615 enh18752 100759201 79586
Blood (T-cell) Astrocyte Stomach Placenta Thymus Epithelial (MCF-7)
chr2 100680845 100694718 enh5736 100759201 64483
Large Intestine Stomach Blood (Karpas-422) Pancreas Heart Epithelial (MCF-7)
chr2 100685193 100685529 vista32462 100759201 73672
VISTA
chr2 100722445 100726595 enh5737 100759201 32606
Blood (Karpas-422)
chr2 100750974 100755146 enh60840 100759201 4055
Blood (OCI-LY7)
chr2 100792585 100796795 enh5738 100759201 33384
Blood (Karpas-422) Epithelial (MCF-7)
chr2 100796965 100802715 enh99692 100759201 37764
Uterus
chr2 100806185 100819675 enh18753 100759201 46984
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Ovary Bone (Osteoblast) Stomach Placenta Thyroid Muscle (Myotube) Uterus Heart
chr2 100814245 100814421 vista32463 100759201 55044
VISTA
chr2 100827390 100837255 enh5739 100759201 68189
Liver (HepG2) Large Intestine Liver Stomach Blood (Karpas-422) Pancreas Blood (T-cell) Heart
chr2 100848725 100855755 enh5740 100759201 89524
Prostate (PC-3) Blood (T-cell) Astrocyte Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus
chr2 100856905 100868216 enh5741 100759201 97704
Astrocyte Blood (OCI-LY7) Placenta Blood (Karpas-422) Spleen
Transcript facotrs that regulate AFF3[ENSG00000144218.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 100754188 100754202 PLAG1 JASPAR yes 100759201 4999 75731877
chr2 100754222 100754233 DMRT3 JASPAR yes 100759201 4968 75731878
chr2 100754273 100754276 MYB TRANSFAC yes 100759201 4925 75731879
chr2 100754281 100754290 HIC2 JASPAR yes 100759201 4911 75731880
chr2 100754313 100754318 GATA2 JASPAR yes 100759201 4883 75731881
chr2 100754317 100754321 YY1 TRANSFAC yes 100759201 4880 75731882
chr2 100754347 100754350 MYB TRANSFAC yes 100759201 4851 75731883
chr2 100754371 100754376 ETS2 TRANSFAC yes 100759201 4825 75731884
chr2 100754392 100754405 ZBTB18 JASPAR yes 100759201 4796 75731885
chr2 100754393 100754405 NHLH1 JASPAR yes 100759201 4796 75731886
chr2 100754394 100754404 NHLH1 JASPAR yes 100759201 4797 75731887
chr2 100754408 100754419 DUX4 JASPAR yes 100759201 4782 75731888
chr2 100754408 100754426 NFYA JASPAR yes 100759201 4775 75731889
chr2 100754418 100754432 SPI1 JASPAR yes 100759201 4769 75731890
chr2 100754418 100754432 SPIC JASPAR yes 100759201 4769 75731891
chr2 100754426 100754439 ELF1 JASPAR yes 100759201 4762 75731892
chr2 100754429 100754440 FLI1 JASPAR yes 100759201 4761 75731893
chr2 100754443 100754457 TLX1 JASPAR yes 100759201 4744 75731894
chr2 100754444 100754458 TLX1 JASPAR yes 100759201 4743 75731895
chr2 100754446 100754452 YY1 JASPAR yes 100759201 4749 75731896
chr2 100754476 100754480 YY1 TRANSFAC yes 100759201 4721 75731897
chr2 100754480 100754492 FOXC2 JASPAR yes 100759201 4709 75731898
chr2 100754498 100754507 VENTX JASPAR yes 100759201 4694 75731899
chr2 100754518 100754521 MYB TRANSFAC yes 100759201 4680 75731900
chr2 100754544 100754549 MYC TRANSFAC yes 100759201 4652 75731901
chr2 100754569 100754573 YY1 TRANSFAC yes 100759201 4628 75731902
chr2 100754585 100754593 MEIS2 JASPAR yes 100759201 4608 75731903
chr2 100754585 100754593 MEIS3 JASPAR yes 100759201 4608 75731904
chr2 100754586 100754590 NFE TRANSFAC yes 100759201 4611 75731905
chr2 100754599 100754603 NFE TRANSFAC yes 100759201 4598 75731906
chr2 100754599 100754604 GATA1 TRANSFAC yes 100759201 4597 75731907
chr2 100754599 100754605 GATA3 JASPAR yes 100759201 4596 75731908
chr2 100754605 100754616 FLI1 JASPAR yes 100759201 4585 75731909
chr2 100754606 100754616 GABPA JASPAR yes 100759201 4585 75731910
chr2 100754606 100754619 ELF1 JASPAR yes 100759201 4582 75731911
chr2 100754607 100754615 EHF JASPAR yes 100759201 4586 75731912
chr2 100754629 100754634 ETS2 TRANSFAC yes 100759201 4567 75731913
chr2 100754636 100754641 TFAP2A TRANSFAC yes 100759201 4560 75731914
chr2 100754636 100754642 MZF1 JASPAR yes 100759201 4559 75731915
chr2 100754640 100754651 NFE2 JASPAR yes 100759201 4550 75731916
chr2 100754666 100754672 GATA3 JASPAR yes 100759201 4529 75731917
chr2 100754669 100754682 ELF1 JASPAR yes 100759201 4519 75731918
chr2 100754670 100754680 ELK1 JASPAR yes 100759201 4521 75731919
chr2 100754670 100754682 EHF JASPAR yes 100759201 4519 75731920
chr2 100754670 100754682 ELF1 JASPAR yes 100759201 4519 75731921
chr2 100754670 100754682 ELF4 JASPAR yes 100759201 4519 75731922
chr2 100754672 100754681 ELK4 JASPAR yes 100759201 4520 75731923
chr2 100754672 100754682 ELK1 JASPAR yes 100759201 4519 75731924
chr2 100754672 100754682 ELK3 JASPAR yes 100759201 4519 75731925
chr2 100754672 100754682 ERF JASPAR yes 100759201 4519 75731926
chr2 100754672 100754682 ERG JASPAR yes 100759201 4519 75731927
chr2 100754672 100754682 ETS1 JASPAR yes 100759201 4519 75731928
chr2 100754672 100754682 ETV1 JASPAR yes 100759201 4519 75731929
chr2 100754672 100754682 ETV3 JASPAR yes 100759201 4519 75731930
chr2 100754672 100754682 ETV4 JASPAR yes 100759201 4519 75731931
chr2 100754672 100754682 ETV5 JASPAR yes 100759201 4519 75731932
chr2 100754672 100754682 ETV6 JASPAR yes 100759201 4519 75731933
chr2 100754672 100754682 FEV JASPAR yes 100759201 4519 75731934
chr2 100754672 100754682 FLI1 JASPAR yes 100759201 4519 75731935
chr2 100754672 100754682 GABPA JASPAR yes 100759201 4519 75731936
chr2 100754672 100754683 ELK4 JASPAR yes 100759201 4518 75731937
chr2 100754673 100754681 FEV JASPAR yes 100759201 4520 75731938
chr2 100754674 100754680 ETS1 JASPAR yes 100759201 4521 75731939
chr2 100754674 100754680 SPI1 JASPAR yes 100759201 4521 75731940
chr2 100754700 100754711 EBF1 JASPAR yes 100759201 4490 75731941
chr2 100754708 100754712 LFA1 TRANSFAC yes 100759201 4489 75731942
chr2 100754713 100754723 TFEB JASPAR yes 100759201 4478 75731943
chr2 100754713 100754723 TFEC JASPAR yes 100759201 4478 75731944
chr2 100754713 100754724 USF1 JASPAR yes 100759201 4477 75731945
chr2 100754713 100754724 USF2 JASPAR yes 100759201 4477 75731946
chr2 100754714 100754724 MAX JASPAR yes 100759201 4477 75731947
chr2 100754722 100754730 FOXO3 JASPAR yes 100759201 4471 75731948
chr2 100754728 100754741 NR2F1 JASPAR yes 100759201 4460 75731949
chr2 100754732 100754736 ESR1 TRANSFAC yes 100759201 4465 75731950
chr2 100754735 100754756 ZNF263 JASPAR yes 100759201 4445 75731951
chr2 100754779 100754783 H1TF2 TRANSFAC yes 100759201 4418 75731952
chr2 100754779 100754783 NFE TRANSFAC yes 100759201 4418 75731953
chr2 100754779 100754783 SRF TRANSFAC yes 100759201 4418 75731954
chr2 100754785 100754790 TFAP2A TRANSFAC yes 100759201 4411 75731955
chr2 100754785 100754791 MZF1 JASPAR yes 100759201 4410 75731956
chr2 100754793 100754803 RORA JASPAR yes 100759201 4398 75731957
chr2 100754795 100754803 CREB1 JASPAR yes 100759201 4398 75731958
chr2 100754798 100754802 ESR1 TRANSFAC yes 100759201 4399 75731959
chr2 100754800 100754812 PKNOX1 JASPAR yes 100759201 4389 75731960
chr2 100754800 100754812 PKNOX2 JASPAR yes 100759201 4389 75731961
chr2 100754800 100754812 TGIF1 JASPAR yes 100759201 4389 75731962
chr2 100754806 100754810 NFE TRANSFAC yes 100759201 4391 75731963
chr2 100754807 100754823 RFX5 JASPAR yes 100759201 4378 75731964
chr2 100754825 100754835 TFEB JASPAR yes 100759201 4366 75731965
chr2 100754825 100754835 TFEC JASPAR yes 100759201 4366 75731966
chr2 100754825 100754836 USF1 JASPAR yes 100759201 4365 75731967
chr2 100754825 100754836 USF2 JASPAR yes 100759201 4365 75731968
chr2 100754849 100754853 YY1 TRANSFAC yes 100759201 4348 75731969
chr2 100754853 100754865 TEAD1 JASPAR yes 100759201 4336 75731970
chr2 100754870 100754873 MYB TRANSFAC yes 100759201 4328 75731971
chr2 100754885 100754891 TCF4 TRANSFAC yes 100759201 4310 75731972
chr2 100754896 100754911 MEF2A JASPAR yes 100759201 4290 75731973
chr2 100754897 100754912 MEF2C JASPAR yes 100759201 4289 75731974
chr2 100754898 100754910 MEF2A JASPAR yes 100759201 4291 75731975
chr2 100754898 100754910 MEF2B JASPAR yes 100759201 4291 75731976
chr2 100754898 100754910 MEF2D JASPAR yes 100759201 4291 75731977
chr2 100754899 100754909 MEF2A JASPAR yes 100759201 4292 75731978
chr2 100754900 100754904 YY1 TRANSFAC yes 100759201 4297 75731979
chr2 100754904 100754917 DUXA JASPAR yes 100759201 4284 75731980
chr2 100754904 100754922 ESR1 JASPAR yes 100759201 4279 75731981
chr2 100754905 100754916 DUX4 JASPAR yes 100759201 4285 75731982
chr2 100754920 100754924 H1TF2 TRANSFAC yes 100759201 4277 75731983
chr2 100754920 100754924 NFE TRANSFAC yes 100759201 4277 75731984
chr2 100754920 100754924 SRF TRANSFAC yes 100759201 4277 75731985
chr2 100754943 100754947 YY1 TRANSFAC yes 100759201 4254 75731986
chr2 100754945 100754951 TCF4 TRANSFAC yes 100759201 4250 75731987
chr2 100754958 100754979 IRF1 JASPAR yes 100759201 4222 75731988
chr2 100754961 100754974 DUXA JASPAR yes 100759201 4227 75731989
chr2 100754961 100754975 JUN JASPAR yes 100759201 4226 75731990
chr2 100754961 100754975 STAT1 JASPAR yes 100759201 4226 75731991
chr2 100754962 100754973 BATF JASPAR yes 100759201 4228 75731992
chr2 100754962 100754973 DUX4 JASPAR yes 100759201 4228 75731993
chr2 100754962 100754976 IRF7 JASPAR yes 100759201 4225 75731994
chr2 100754962 100754977 IRF9 JASPAR yes 100759201 4224 75731995
chr2 100754966 100754981 STAT2 JASPAR yes 100759201 4220 75731996
chr2 100754973 100754977 NFE TRANSFAC yes 100759201 4224 75731997
chr2 100754976 100754987 CEBPA JASPAR yes 100759201 4214 75731998
chr2 100754980 100754993 SCRT2 JASPAR yes 100759201 4208 75731999
chr2 100754994 100754998 NFE TRANSFAC yes 100759201 4203 75732000
chr2 100754994 100754999 GATA1 TRANSFAC yes 100759201 4202 75732001
chr2 100754994 100755000 GATA3 JASPAR yes 100759201 4201 75732002
chr2 100755017 100755024 SPIB JASPAR yes 100759201 4177 75732003
chr2 100755017 100755038 ZNF263 JASPAR yes 100759201 4163 75732004
chr2 100755044 100755053 NKX3-2 JASPAR yes 100759201 4148 75732005
chr2 100755044 100755054 NKX2-3 JASPAR yes 100759201 4147 75732006
chr2 100755045 100755053 ISL2 JASPAR yes 100759201 4148 75732007
chr2 100755045 100755054 NKX2-8 JASPAR yes 100759201 4147 75732008
chr2 100755056 100755061 H4TF1 TRANSFAC yes 100759201 4140 75732009
chr2 100755059 100755074 FOXP1 JASPAR yes 100759201 4127 75732010
chr2 100755063 100755078 RUNX2 JASPAR yes 100759201 4123 75732011
chr2 100755066 100755077 RUNX1 JASPAR yes 100759201 4124 75732012
chr2 100755072 100755076 ESR1 TRANSFAC yes 100759201 4125 75732013
chr2 100755094 100755112 IRF2 JASPAR yes 100759201 4089 75732014
chr2 100755122 100755136 MTF1 JASPAR yes 100759201 4065 75732015
chr2 100755132 100755143 FOSL2 JASPAR yes 100759201 4058 75732016
SNPs associated with AFF3[ENSG00000144218.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 100859052 rs144267175 C CT 99851 Esophagus 0.235493 5912186
chr2 100175826 rs139656829 C G 0 Heart 0.0274525 5908819
chr2 100175826 rs139656829 C G 0 Heart 0.185147 5908819
chr2 100637331 rs11675333 G A 0 Lung 7.07234e-05 5911175
chr2 100518310 rs796937951 GC G 0 Adrenal 0.194373 5910608
Details of AFF3[ENSG00000144218.14]
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Genomic Location chr2:100162323-100759201[-]
TSS 100759201
Gene Name AFF3
Ensembl ID ENSG00000144218.14
ENTREZID 3899
Uniprot
Q8NAP7
P51826
Protein Name
AF4/FMR2 family member 3
Alternative protein AFF3
Expression levels of AFF3[ENSG00000144218.14]
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