EnhancerDB
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Enhancers that regulate RQCD1[ENSG00000144580.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 219336861 219337006 vista34780 219433303 96297
VISTA
chr2 219364325 219368695 enh70174 219433303 64608
Ovary Muscle (A673) Thyroid Spleen Neural Stem Cells (H9) Stomach
chr2 219368785 219372935 enh76562 219433303 60368
Muscle (A673)
chr2 219379685 219384455 enh104929 219433303 48848
Peripheral Blood (MM.1S)
chr2 219434664 219435146 vista34781 219433303 1361
VISTA
chr2 219440594 219444935 enh65399 219433303 7291
Heart
Transcript facotrs that regulate RQCD1[ENSG00000144580.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 219432680 219435106 POLR2A UCSC Txn Factor no Conserved 219433303 623 108435215
chr2 219434666 219434669 MYB TRANSFAC yes 219433303 1363 22211094
chr2 219434704 219434714 MEOX2 JASPAR yes 219433303 1401 22211095
chr2 219434720 219434732 FOXI1 JASPAR yes 219433303 1417 22211096
chr2 219434723 219434727 YY1 TRANSFAC yes 219433303 1420 22211097
chr2 219434729 219434742 SMAD2 JASPAR yes 219433303 1426 22211098
chr2 219434733 219434737 NFE TRANSFAC yes 219433303 1430 22211099
chr2 219434735 219434750 TFAP2A JASPAR yes 219433303 1432 22211100
chr2 219434742 219434751 THAP1 JASPAR yes 219433303 1439 22211101
chr2 219434745 219434749 LFA1 TRANSFAC yes 219433303 1442 22211102
chr2 219434756 219434764 RHOXF1 JASPAR yes 219433303 1453 22211103
chr2 219434758 219434769 USF1 JASPAR yes 219433303 1455 22211104
chr2 219434759 219434769 TFEB JASPAR yes 219433303 1456 22211105
chr2 219434759 219434769 TFEC JASPAR yes 219433303 1456 22211106
chr2 219434759 219434770 USF2 JASPAR yes 219433303 1456 22211107
chr2 219434770 219434782 CREB1 JASPAR yes 219433303 1467 22211108
chr2 219434772 219434786 CREB3L1 JASPAR yes 219433303 1469 22211109
chr2 219434775 219434780 ATF1 TRANSFAC yes 219433303 1472 22211110
chr2 219434812 219434827 LEF1 JASPAR yes 219433303 1509 22211111
chr2 219434832 219434838 TCF4 TRANSFAC yes 219433303 1529 22211112
chr2 219434841 219434847 TCF4 TRANSFAC yes 219433303 1538 22211113
chr2 219434851 219434856 MYB TRANSFAC yes 219433303 1548 22211114
chr2 219434857 219434862 ETS2 TRANSFAC yes 219433303 1554 22211115
chr2 219434876 219434892 SOX4 JASPAR yes 219433303 1573 22211116
chr2 219434887 219434897 MZF1 JASPAR yes 219433303 1584 22211117
chr2 219434890 219434895 TFAP2A TRANSFAC yes 219433303 1587 22211118
chr2 219434890 219434896 MZF1 JASPAR yes 219433303 1587 22211119
chr2 219434890 219435166 JUND UCSC Txn Factor no Conserved 219433303 1587 108435216
chr2 219434904 219434908 YY1 TRANSFAC yes 219433303 1601 22211120
chr2 219434933 219434937 H1TF2 TRANSFAC yes 219433303 1630 22211121
chr2 219434933 219434937 NFE TRANSFAC yes 219433303 1630 22211122
chr2 219434933 219434937 SRF TRANSFAC yes 219433303 1630 22211123
chr2 219434934 219434948 SPI1 JASPAR yes 219433303 1631 22211124
chr2 219434945 219434957 HNF1B JASPAR yes 219433303 1642 22211125
chr2 219434953 219434956 MYB TRANSFAC yes 219433303 1650 22211126
chr2 219434973 219434978 ETS2 TRANSFAC yes 219433303 1670 22211127
chr2 219434973 219434991 NR3C1 JASPAR yes 219433303 1670 22211128
chr2 219434974 219434992 NR3C1 JASPAR yes 219433303 1671 22211129
chr2 219434984 219435000 SOX4 JASPAR yes 219433303 1681 22211130
chr2 219434991 219435002 PHOX2A JASPAR yes 219433303 1688 22211131
chr2 219434991 219435002 PROP1 JASPAR yes 219433303 1688 22211132
chr2 219435007 219435022 JUND JASPAR yes 219433303 1704 22211133
chr2 219435008 219435021 JUN JASPAR yes 219433303 1705 22211134
chr2 219435009 219435022 ATF4 JASPAR yes 219433303 1706 22211135
chr2 219435009 219435023 ATF7 JASPAR yes 219433303 1706 22211136
chr2 219435009 219435023 BATF3 JASPAR yes 219433303 1706 22211137
chr2 219435010 219435022 DBP JASPAR yes 219433303 1707 22211138
chr2 219435010 219435022 HLF JASPAR yes 219433303 1707 22211139
chr2 219435010 219435022 JDP2 JASPAR yes 219433303 1707 22211140
chr2 219435010 219435022 TEF JASPAR yes 219433303 1707 22211141
chr2 219435010 219435025 JUND JASPAR yes 219433303 1707 22211142
chr2 219435011 219435024 DUXA JASPAR yes 219433303 1708 22211143
chr2 219435011 219435025 RORA JASPAR yes 219433303 1708 22211144
chr2 219435012 219435017 ATF1 TRANSFAC yes 219433303 1709 22211145
chr2 219435012 219435020 CREB1 JASPAR yes 219433303 1709 22211146
chr2 219435012 219435020 GMEB2 JASPAR yes 219433303 1709 22211147
chr2 219435012 219435023 NFIL3 JASPAR yes 219433303 1709 22211148
chr2 219435012 219435023 PHOX2A JASPAR yes 219433303 1709 22211149
chr2 219435015 219435025 EMX2 JASPAR yes 219433303 1712 22211150
chr2 219435015 219435025 EVX1 JASPAR yes 219433303 1712 22211151
chr2 219435015 219435025 HOXA2 JASPAR yes 219433303 1712 22211152
chr2 219435015 219435025 HOXB2 JASPAR yes 219433303 1712 22211153
chr2 219435015 219435025 MEOX1 JASPAR yes 219433303 1712 22211154
chr2 219435015 219435025 MEOX2 JASPAR yes 219433303 1712 22211155
chr2 219435018 219435036 SRF JASPAR yes 219433303 1715 22211156
chr2 219435043 219435055 BHLHE23 JASPAR yes 219433303 1740 22211157
chr2 219435044 219435054 BHLHE22 JASPAR yes 219433303 1741 22211158
chr2 219435044 219435054 NEUROD2 JASPAR yes 219433303 1741 22211159
chr2 219435044 219435054 OLIG2 JASPAR yes 219433303 1741 22211160
chr2 219435054 219435061 NKX3-1 JASPAR yes 219433303 1751 22211161
chr2 219435055 219435070 AR JASPAR yes 219433303 1752 22211162
chr2 219435057 219435078 IRF1 JASPAR yes 219433303 1754 22211163
chr2 219435060 219435074 IRF7 JASPAR yes 219433303 1757 22211164
chr2 219435061 219435076 PRDM1 JASPAR yes 219433303 1758 22211165
chr2 219435062 219435074 IRF1 JASPAR yes 219433303 1759 22211166
chr2 219435080 219435094 JUN JASPAR yes 219433303 1777 22211167
chr2 219435082 219435093 BATF JASPAR yes 219433303 1779 22211168
chr2 219435083 219435094 JUNB JASPAR yes 219433303 1780 22211169
chr2 219435084 219435095 FOS JASPAR yes 219433303 1781 22211170
chr2 219435085 219435096 NFE2L2 JASPAR yes 219433303 1782 22211171
SNPs associated with RQCD1[ENSG00000144580.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 219443129 rs60349560 A G 0 Pancreas 0.335184 6368770
chr2 220126630 rs144689358 A C 664827 Liver 0.659152 6371052
Details of RQCD1[ENSG00000144580.9]
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Genomic Location chr2:219433303-219461803[+]
TSS 219433303
Gene Name RQCD1
Ensembl ID ENSG00000144580.9
ENTREZID
Uniprot
Protein Name
CCR4-NOT transcription complex subunit 9
RQCD1 protein
Expression levels of RQCD1[ENSG00000144580.9]
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