EnhancerDB
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Enhancers that regulate CAPN13[ENSG00000162949.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 31017685 31023655 enh69626 31043408 19753
Neural Stem Cells (H9) Brain (SK-N-MC) Stomach
chr2 31031225 31039375 enh18416 31043408 4033
Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
chr2 31067945 31072975 enh81615 31043408 24537
Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
chr2 31087196 31097235 enh60793 31043408 43788
Esophagus Blood (OCI-LY7) Lung (PC-9) Heart Epithelial (MCF-7)
chr2 31098845 31102995 enh108743 31043408 55437
Lung (PC-9)
Transcript facotrs that regulate CAPN13[ENSG00000162949.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 31038394 31038412 NR3C1 JASPAR yes 31043408 4996 72792605
chr2 31038423 31038428 GATA2 JASPAR yes 31043408 4980 72792606
chr2 31038445 31038466 IRF1 JASPAR yes 31043408 4942 72792607
chr2 31038478 31038496 MAFF JASPAR yes 31043408 4912 72792608
chr2 31038480 31038495 MAFK JASPAR yes 31043408 4913 72792609
chr2 31038531 31038536 ETS2 TRANSFAC yes 31043408 4872 72792610
chr2 31038551 31038556 ETS2 TRANSFAC yes 31043408 4852 72792611
chr2 31038552 31038567 AR JASPAR yes 31043408 4841 72792612
chr2 31038552 31038569 NR3C1 JASPAR yes 31043408 4839 72792613
chr2 31038552 31038569 NR3C2 JASPAR yes 31043408 4839 72792614
chr2 31038580 31038596 SOX8 JASPAR yes 31043408 4812 72792615
chr2 31038582 31038592 NFIA JASPAR yes 31043408 4816 72792616
chr2 31038584 31038590 NFIC JASPAR yes 31043408 4818 72792617
chr2 31038617 31038628 DUX4 JASPAR yes 31043408 4780 72792618
chr2 31038630 31038633 MYB TRANSFAC yes 31043408 4775 72792619
chr2 31038642 31038645 MYB TRANSFAC yes 31043408 4763 72792620
chr2 31038650 31038653 MYB TRANSFAC yes 31043408 4755 72792621
chr2 31038682 31038685 MYB TRANSFAC yes 31043408 4723 72792622
chr2 31038691 31038694 MYB TRANSFAC yes 31043408 4714 72792623
chr2 31038697 31038711 POU1F1 JASPAR yes 31043408 4697 72792624
chr2 31038698 31038710 POU3F1 JASPAR yes 31043408 4698 72792625
chr2 31038698 31038710 POU3F2 JASPAR yes 31043408 4698 72792626
chr2 31038698 31038711 POU2F2 JASPAR yes 31043408 4697 72792627
chr2 31038699 31038708 POU3F4 JASPAR yes 31043408 4700 72792628
chr2 31038699 31038708 POU5F1B JASPAR yes 31043408 4700 72792629
chr2 31038719 31038729 ALX3 JASPAR yes 31043408 4679 72792630
chr2 31038719 31038729 ESX1 JASPAR yes 31043408 4679 72792631
chr2 31038719 31038729 GSX1 JASPAR yes 31043408 4679 72792632
chr2 31038719 31038729 GSX2 JASPAR yes 31043408 4679 72792633
chr2 31038719 31038729 LBX2 JASPAR yes 31043408 4679 72792634
chr2 31038719 31038729 MIXL1 JASPAR yes 31043408 4679 72792635
chr2 31038719 31038729 MNX1 JASPAR yes 31043408 4679 72792636
chr2 31038719 31038729 RAX JASPAR yes 31043408 4679 72792637
chr2 31038720 31038724 H1TF2 TRANSFAC yes 31043408 4684 72792638
chr2 31038720 31038724 NFE TRANSFAC yes 31043408 4684 72792639
chr2 31038720 31038724 SRF TRANSFAC yes 31043408 4684 72792640
chr2 31038720 31038728 BARX1 JASPAR yes 31043408 4680 72792641
chr2 31038720 31038728 BSX JASPAR yes 31043408 4680 72792642
chr2 31038720 31038728 DLX6 JASPAR yes 31043408 4680 72792643
chr2 31038720 31038728 ISX JASPAR yes 31043408 4680 72792644
chr2 31038720 31038728 LBX1 JASPAR yes 31043408 4680 72792645
chr2 31038720 31038728 LHX9 JASPAR yes 31043408 4680 72792646
chr2 31038720 31038728 MSX1 JASPAR yes 31043408 4680 72792647
chr2 31038720 31038728 MSX2 JASPAR yes 31043408 4680 72792648
chr2 31038720 31038728 NKX6-2 JASPAR yes 31043408 4680 72792649
chr2 31038720 31038728 PRRX1 JASPAR yes 31043408 4680 72792650
chr2 31038720 31038728 RAX2 JASPAR yes 31043408 4680 72792651
chr2 31038720 31038728 SHOX JASPAR yes 31043408 4680 72792652
chr2 31038720 31038728 UNCX JASPAR yes 31043408 4680 72792653
chr2 31038720 31038730 HOXA13 JASPAR yes 31043408 4678 72792654
chr2 31038720 31038730 HOXB13 JASPAR yes 31043408 4678 72792655
chr2 31038720 31038730 HOXD13 JASPAR yes 31043408 4678 72792656
chr2 31038748 31038753 GATA2 JASPAR yes 31043408 4655 72792657
chr2 31038752 31038757 ETS2 TRANSFAC yes 31043408 4651 72792658
chr2 31038816 31038831 MEF2C JASPAR yes 31043408 4577 72792659
chr2 31038817 31038832 MEF2A JASPAR yes 31043408 4576 72792660
chr2 31038818 31038830 MEF2A JASPAR yes 31043408 4578 72792661
chr2 31038818 31038830 MEF2D JASPAR yes 31043408 4578 72792662
chr2 31038823 31038844 ZNF263 JASPAR yes 31043408 4564 72792663
chr2 31038835 31038841 PEA3 TRANSFAC yes 31043408 4567 72792664
chr2 31038853 31038874 IRF1 JASPAR yes 31043408 4534 72792665
chr2 31038854 31038869 FOXP1 JASPAR yes 31043408 4539 72792666
chr2 31038855 31038865 NFATC3 JASPAR yes 31043408 4543 72792667
chr2 31038855 31038876 IRF1 JASPAR yes 31043408 4532 72792668
chr2 31038857 31038864 NFATC2 JASPAR yes 31043408 4544 72792669
chr2 31038859 31038874 FOXP1 JASPAR yes 31043408 4534 72792670
chr2 31038871 31038883 INSM1 JASPAR yes 31043408 4525 72792671
chr2 31038911 31038923 FOXC2 JASPAR yes 31043408 4485 72792672
chr2 31038918 31038924 SOX10 JASPAR yes 31043408 4484 72792673
chr2 31038920 31038934 TCF7L2 JASPAR yes 31043408 4474 72792674
chr2 31038920 31038935 LEF1 JASPAR yes 31043408 4473 72792675
chr2 31038934 31038940 SOX10 JASPAR yes 31043408 4468 72792676
chr2 31038943 31038960 ZNF410 JASPAR yes 31043408 4448 72792677
chr2 31038944 31038955 NFIL3 JASPAR yes 31043408 4453 72792678
chr2 31038945 31038949 YY1 TRANSFAC yes 31043408 4459 72792679
chr2 31038945 31038956 CEBPB JASPAR yes 31043408 4452 72792680
chr2 31038945 31038957 DBP JASPAR yes 31043408 4451 72792681
chr2 31038945 31038957 HLF JASPAR yes 31043408 4451 72792682
chr2 31038945 31038957 TEF JASPAR yes 31043408 4451 72792683
chr2 31038947 31038958 NFIL3 JASPAR yes 31043408 4450 72792684
chr2 31038962 31038970 RHOXF1 JASPAR yes 31043408 4438 72792685
chr2 31038985 31038988 MYB TRANSFAC yes 31043408 4420 72792686
chr2 31038990 31039005 MEF2C JASPAR yes 31043408 4403 72792687
chr2 31038991 31039006 MEF2A JASPAR yes 31043408 4402 72792688
chr2 31038992 31039004 MEF2A JASPAR yes 31043408 4404 72792689
chr2 31038992 31039004 MEF2B JASPAR yes 31043408 4404 72792690
chr2 31038992 31039004 MEF2D JASPAR yes 31043408 4404 72792691
chr2 31039007 31039027 RREB1 JASPAR yes 31043408 4381 72792692
chr2 31039029 31039036 TBP TRANSFAC yes 31043408 4372 72792693
chr2 31039029 31039036 TFIID TRANSFAC yes 31043408 4372 72792694
chr2 31039055 31039061 SOX10 JASPAR yes 31043408 4347 72792695
chr2 31039095 31039105 TBR1 JASPAR yes 31043408 4303 72792696
chr2 31039095 31039106 TBX20 JASPAR yes 31043408 4302 72792697
chr2 31039095 31039106 TBX2 JASPAR yes 31043408 4302 72792698
chr2 31039095 31039115 TBX19 JASPAR yes 31043408 4293 72792699
chr2 31039097 31039100 MYB TRANSFAC yes 31043408 4308 72792700
chr2 31039107 31039111 NFE TRANSFAC yes 31043408 4297 72792701
chr2 31039107 31039114 MEIS1 JASPAR yes 31043408 4294 72792702
chr2 31039114 31039118 YY1 TRANSFAC yes 31043408 4290 72792703
chr2 31039125 31039146 IRF1 JASPAR yes 31043408 4262 72792704
chr2 31039127 31039142 IRF9 JASPAR yes 31043408 4266 72792705
chr2 31039142 31039145 MYB TRANSFAC yes 31043408 4263 72792706
chr2 31039148 31039153 GATA2 JASPAR yes 31043408 4255 72792707
chr2 31039148 31039165 BCL6B JASPAR yes 31043408 4243 72792708
chr2 31039149 31039164 STAT1 JASPAR yes 31043408 4244 72792709
chr2 31039151 31039156 GATA2 JASPAR yes 31043408 4252 72792710
chr2 31039160 31039165 MYB TRANSFAC yes 31043408 4243 72792711
chr2 31039162 31039176 NR2F1 JASPAR yes 31043408 4232 72792712
chr2 31039214 31039234 RREB1 JASPAR yes 31043408 4174 72792713
chr2 31039216 31039227 FOXH1 JASPAR yes 31043408 4181 72792714
chr2 31039232 31039242 TEAD1 JASPAR yes 31043408 4166 72792715
chr2 31039243 31039263 RREB1 JASPAR yes 31043408 4145 72792716
chr2 31039246 31039266 RREB1 JASPAR yes 31043408 4142 72792717
chr2 31039251 31039262 TBX20 JASPAR yes 31043408 4146 72792718
chr2 31039253 31039261 TBX5 JASPAR yes 31043408 4147 72792719
chr2 31039325 31039329 TEAD2 TRANSFAC yes 31043408 4079 72792720
chr2 31039327 31039330 MYB TRANSFAC yes 31043408 4078 72792721
chr2 31039334 31039338 NFE TRANSFAC yes 31043408 4070 72792722
chr2 31039334 31039347 SMAD2 JASPAR yes 31043408 4061 72792723
chr2 31039342 31039357 HNF4A JASPAR yes 31043408 4051 72792724
chr2 31039342 31039357 RUNX2 JASPAR yes 31043408 4051 72792725
chr2 31039343 31039359 ZNF143 JASPAR yes 31043408 4049 72792726
chr2 31039349 31039368 PAX5 JASPAR yes 31043408 4040 72792727
SNPs associated with CAPN13[ENSG00000162949.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 30905059 rs35148876 G A 40578 Pancreas 0.323909 5622821
chr2 30407566 rs1355207 G A 538071 Spleen 0.411028 5618571
chr2 31307495 rs72793400 G C 264087 Stomach 0.277431 5624499
Details of CAPN13[ENSG00000162949.12]
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Genomic Location chr2:30945637-31043408[-]
TSS 31043408
Gene Name CAPN13
Ensembl ID ENSG00000162949.12
ENTREZID 92291
Uniprot
Q6MZZ7
Protein Name
Calpain-13
Expression levels of CAPN13[ENSG00000162949.12]
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