EnhancerDB
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Enhancers that regulate TMEM41A[ENSG00000163900.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 185117105 185124175 enh59286 185216845 92670
Skin (Keratinocyte) Peripheral Blood (MM.1S) Brain (SK-N-SH)
chr3 185126874 185131404 enh59287 185216845 85441
Skin (Keratinocyte)
chr3 185134505 185143535 enh61122 185216845 73310
Cervix (HeLa-S3) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Stomach
chr3 185171805 185180755 enh21171 185216845 36090
Spleen Placenta
chr3 185215412 185215562 vista43458 185216845 1283
VISTA
chr3 185246765 185250915 enh54527 185216845 29920
Large Intestine
chr3 185253122 185257669 enh36216 185216845 36277
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Peripheral Blood (MM.1S) Breast Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
chr3 185261238 185269346 enh36217 185216845 44393
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Pancreas Pancreas (Panc1)
chr3 185273945 185281935 enh21172 185216845 57100
Placenta Stomach
chr3 185291125 185295275 enh110106 185216845 74280
Stomach
chr3 185311327 185315691 enh7738 185216845 94482
Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422)
Transcript facotrs that regulate TMEM41A[ENSG00000163900.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 185215418 185215432 NR2F1 JASPAR yes 185216845 1413 71099859
chr3 185215443 185215447 NFE TRANSFAC yes 185216845 1398 71099860
chr3 185215443 185215448 GATA1 TRANSFAC yes 185216845 1397 71099861
chr3 185215443 185215449 GATA3 JASPAR yes 185216845 1396 71099862
chr3 185215456 185215462 YY1 JASPAR yes 185216845 1383 71099863
chr3 185215479 185215494 HNF1A JASPAR yes 185216845 1351 71099864
chr3 185215480 185215493 HNF1B JASPAR yes 185216845 1352 71099865
chr3 185215481 185215493 HNF1B JASPAR yes 185216845 1352 71099866
chr3 185215483 185215493 LHX6 JASPAR yes 185216845 1352 71099867
chr3 185215487 185215499 HNF1B JASPAR yes 185216845 1346 71099868
chr3 185215509 185215524 ZBTB33 JASPAR yes 185216845 1321 71099869
chr3 185215512 185215527 ZBTB33 JASPAR yes 185216845 1318 71099870
SNPs associated with TMEM41A[ENSG00000163900.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 184506006 rs151162639 C T 688278 Esophagus 0.243683 7251862
chr3 185699853 rs76599083 T C 483008 Esophagus 0.212605 7257444
chr3 184344204 rs148205880 G A 850080 Spleen 0.118587 7250103
chr3 186145277 rs142787045 A G 928432 Ovary 0.330715 7260075
chr3 185691660 rs73178111 C T 474815 Liver 0.441117 7257363
chr3 184464913 rs74639575 C T 729371 Stomach 0.399977 7251225
Details of TMEM41A[ENSG00000163900.6]
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Genomic Location chr3:185194284-185216845[-]
TSS 185216845
Gene Name TMEM41A
Ensembl ID ENSG00000163900.6
ENTREZID 90407
Uniprot
Q96HV5
Protein Name
Transmembrane protein 41A
Expression levels of TMEM41A[ENSG00000163900.6]
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