EnhancerDB
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Enhancers that regulate OTUD4[ENSG00000164164.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 146003165 146007315 enh37154 146101313 93998
Astrocyte
chr4 146015172 146015244 vista46093 146101313 86069
VISTA
chr4 146024258 146024314 vista46094 146101313 76999
VISTA
chr4 146049365 146054535 enh8246 146101313 46778
Astrocyte Blood (Karpas-422)
chr4 146098272 146098411 vista46095 146101313 2902
VISTA
chr4 146101946 146102251 vista46096 146101313 633
VISTA
chr4 146114737 146125375 enh21846 146101313 13424
Prostate (PC-3) Placenta Lung (PC-9) Colon (HCT116)
chr4 146124563 146124904 vista46097 146101313 23250
VISTA
chr4 146135805 146142601 enh45741 146101313 34492
Muscle (Myotube) Neural Stem Cells (H9) Brain (SK-N-MC)
chr4 146149866 146154222 enh88874 146101313 48553
Pancreas Muscle (Myoblast)
chr4 146168085 146172235 enh113761 146101313 66772
Brain (SK-N-MC)
chr4 146187045 146191195 enh113762 146101313 85732
Brain (SK-N-MC)
chr4 146195765 146203095 enh37155 146101313 94452
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Muscle (Myoblast) Muscle (Myotube)
chr4 146200337 146200591 vista46098 146101313 99024
VISTA
Transcript facotrs that regulate OTUD4[ENSG00000164164.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 146098281 146098285 NFE TRANSFAC yes 146101313 3028 49290126
chr4 146098287 146098293 JUN TRANSFAC yes 146101313 3020 49290127
chr4 146098312 146098327 RUNX2 JASPAR yes 146101313 2986 49290128
chr4 146098313 146098322 RUNX2 JASPAR yes 146101313 2991 49290129
chr4 146098313 146098323 RUNX3 JASPAR yes 146101313 2990 49290130
chr4 146098313 146098324 RUNX1 JASPAR yes 146101313 2989 49290131
chr4 146098333 146098344 NFKB1 JASPAR yes 146101313 2969 49290132
chr4 146098339 146098346 SPIB JASPAR yes 146101313 2967 49290133
chr4 146098348 146098352 YY1 TRANSFAC yes 146101313 2961 49290134
chr4 146098377 146098381 YY1 TRANSFAC yes 146101313 2932 49290135
chr4 146098378 146098397 RFX2 JASPAR yes 146101313 2916 49290136
chr4 146098380 146098395 RFX5 JASPAR yes 146101313 2918 49290137
chr4 146098385 146098398 SCRT2 JASPAR yes 146101313 2915 49290138
chr4 146098385 146098400 SCRT1 JASPAR yes 146101313 2913 49290139
chr4 146098385 146098400 ZIC3 JASPAR yes 146101313 2913 49290140
chr4 146098385 146098400 ZIC4 JASPAR yes 146101313 2913 49290141
chr4 146098386 146098400 ZIC1 JASPAR yes 146101313 2913 49290142
chr4 146098389 146098398 SNAI2 JASPAR yes 146101313 2915 49290143
chr4 146098389 146098399 FIGLA JASPAR yes 146101313 2914 49290144
chr4 146098389 146098399 MSC JASPAR yes 146101313 2914 49290145
chr4 146098399 146098411 BHLHE23 JASPAR yes 146101313 2902 49290146
chr4 146098400 146098410 NEUROG2 JASPAR yes 146101313 2903 49290147
chr4 146098400 146098410 OLIG1 JASPAR yes 146101313 2903 49290148
chr4 146099943 146102307 POLR2A UCSC Txn Factor no Conserved 146101313 994 108533583
chr4 146101506 146102046 GABPA UCSC Txn Factor no Conserved 146101313 193 108533584
chr4 146101762 146102334 E2F1 UCSC Txn Factor no Conserved 146101313 449 108533585
chr4 146101797 146102288 PHF8 UCSC Txn Factor no Conserved 146101313 484 108533586
chr4 146101979 146101989 SP1 JASPAR yes 146101313 666 49290149
chr4 146102021 146102040 RFX2 JASPAR yes 146101313 708 49290150
chr4 146102023 146102038 RFX5 JASPAR yes 146101313 710 49290151
chr4 146102025 146102041 RFX4 JASPAR yes 146101313 712 49290152
chr4 146102025 146102041 RFX5 JASPAR yes 146101313 712 49290153
chr4 146102026 146102045 RFX2 JASPAR yes 146101313 713 49290154
chr4 146102058 146102064 SOX10 JASPAR yes 146101313 745 49290155
chr4 146102061 146102072 FOXH1 JASPAR yes 146101313 748 49290156
chr4 146102065 146102069 YY1 TRANSFAC yes 146101313 752 49290157
chr4 146102081 146102090 ZEB1 JASPAR yes 146101313 768 49290158
chr4 146102082 146102092 ID4 JASPAR yes 146101313 769 49290159
chr4 146102082 146102092 TCF3 JASPAR yes 146101313 769 49290160
chr4 146102082 146102092 TCF4 JASPAR yes 146101313 769 49290161
chr4 146102083 146102092 SNAI2 JASPAR yes 146101313 770 49290162
chr4 146102084 146102089 USF2 TRANSFAC yes 146101313 771 49290163
chr4 146102087 146102091 NFE TRANSFAC yes 146101313 774 49290164
chr4 146102096 146102106 SP1 JASPAR yes 146101313 783 49290165
chr4 146102096 146102117 ZNF263 JASPAR yes 146101313 783 49290166
chr4 146102100 146102112 TFAP2A JASPAR yes 146101313 787 49290167
chr4 146102101 146102110 TFAP2A JASPAR yes 146101313 788 49290168
chr4 146102118 146102137 RFX2 JASPAR yes 146101313 805 49290169
chr4 146102122 146102130 FOXO3 JASPAR yes 146101313 809 49290170
chr4 146102122 146102132 NFATC3 JASPAR yes 146101313 809 49290171
chr4 146102122 146102138 RFX3 JASPAR yes 146101313 809 49290172
chr4 146102135 146102150 MYBL2 JASPAR yes 146101313 822 49290173
chr4 146102142 146102145 MYB TRANSFAC yes 146101313 829 49290174
chr4 146102160 146102178 NFYA JASPAR yes 146101313 847 49290175
chr4 146102163 146102179 NFYA JASPAR yes 146101313 850 49290176
chr4 146102165 146102175 EMX2 JASPAR yes 146101313 852 49290177
chr4 146102165 146102175 EN2 JASPAR yes 146101313 852 49290178
chr4 146102165 146102175 ESX1 JASPAR yes 146101313 852 49290179
chr4 146102165 146102175 EVX1 JASPAR yes 146101313 852 49290180
chr4 146102165 146102175 EVX2 JASPAR yes 146101313 852 49290181
chr4 146102165 146102175 GBX1 JASPAR yes 146101313 852 49290182
chr4 146102165 146102175 GBX2 JASPAR yes 146101313 852 49290183
chr4 146102165 146102175 HESX1 JASPAR yes 146101313 852 49290184
chr4 146102165 146102175 HOXA2 JASPAR yes 146101313 852 49290185
chr4 146102165 146102175 HOXB3 JASPAR yes 146101313 852 49290186
chr4 146102165 146102175 LBX2 JASPAR yes 146101313 852 49290187
chr4 146102165 146102175 LHX2 JASPAR yes 146101313 852 49290188
chr4 146102165 146102175 MIXL1 JASPAR yes 146101313 852 49290189
chr4 146102165 146102175 RAX JASPAR yes 146101313 852 49290190
chr4 146102166 146102174 BARX1 JASPAR yes 146101313 853 49290191
chr4 146102166 146102174 BSX JASPAR yes 146101313 853 49290192
chr4 146102166 146102174 EN1 JASPAR yes 146101313 853 49290193
chr4 146102166 146102174 ISX JASPAR yes 146101313 853 49290194
chr4 146102166 146102174 LHX9 JASPAR yes 146101313 853 49290195
chr4 146102166 146102174 MSX1 JASPAR yes 146101313 853 49290196
chr4 146102166 146102174 MSX2 JASPAR yes 146101313 853 49290197
chr4 146102166 146102174 PRRX1 JASPAR yes 146101313 853 49290198
chr4 146102166 146102174 RAX2 JASPAR yes 146101313 853 49290199
chr4 146102166 146102174 SHOX JASPAR yes 146101313 853 49290200
chr4 146102166 146102181 NFYB JASPAR yes 146101313 853 49290201
chr4 146102214 146102218 NFE TRANSFAC yes 146101313 901 49290202
chr4 146102220 146102237 PAX1 JASPAR yes 146101313 907 49290203
chr4 146102220 146102237 PAX9 JASPAR yes 146101313 907 49290204
chr4 146102222 146102236 PAX6 JASPAR yes 146101313 909 49290205
SNPs associated with OTUD4[ENSG00000164164.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 145553765 rs140135791 G C 478225 Esophagus 0.291417 7859556
chr4 145428595 rs57699820 C A,T 603395 Esophagus 0.113808 7859272
chr4 146377064 rs77402919 C T 275751 Liver 0.163587 7861804
chr4 145556226 rs6814581 C T 475764 Adrenal 0.422924 7859584
Details of OTUD4[ENSG00000164164.11]
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Genomic Location chr4:146031990-146101313[-]
TSS 146101313
Gene Name OTUD4
Ensembl ID ENSG00000164164.11
ENTREZID 54726
Uniprot
Q01804
Protein Name
Alternative protein OTUD4
OTU domain-containing protein 4
OTUD4 protein
Expression levels of OTUD4[ENSG00000164164.11]
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