EnhancerDB
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Enhancers that regulate SLC35A1[ENSG00000164414.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 88097721 88097946 vista52691 88180341 82395
VISTA
chr6 88127185 88133555 enh23400 88180341 46786
Placenta Lung (PC-9) Epithelial (MCF-7)
chr6 88152221 88156371 enh72346 88180341 23970
Neural Stem Cells (H9)
chr6 88160287 88160298 vista52692 88180341 20043
VISTA
chr6 88183289 88183642 vista52693 88180341 2948
VISTA
chr6 88189745 88196686 enh86637 88180341 9404
Colon (HCT116) Brain (SK-N-MC) Prostate (RWPE1) Epithelial (MCF-7)
chr6 88213981 88214157 vista52694 88180341 33640
VISTA
chr6 88242205 88247235 enh55880 88180341 61864
Liver (HepG2) Large Intestine
chr6 88279425 88295795 enh39232 88180341 99084
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Uterus Thymus Epithelial (MCF-7)
Transcript facotrs that regulate SLC35A1[ENSG00000164414.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 88182293 88183666 POLR2A UCSC Txn Factor no Conserved 88180341 1952 108540914
chr6 88183293 88183301 TBX15 JASPAR yes 88180341 2952 70397221
chr6 88183293 88183302 ZEB1 JASPAR yes 88180341 2952 70397222
chr6 88183294 88183304 FIGLA JASPAR yes 88180341 2953 70397223
chr6 88183294 88183304 TCF3 JASPAR yes 88180341 2953 70397224
chr6 88183294 88183304 TCF4 JASPAR yes 88180341 2953 70397225
chr6 88183295 88183304 SNAI2 JASPAR yes 88180341 2954 70397226
chr6 88183296 88183301 USF2 TRANSFAC yes 88180341 2955 70397227
chr6 88183309 88183320 FOXB1 JASPAR yes 88180341 2968 70397228
chr6 88183311 88183321 MEOX2 JASPAR yes 88180341 2970 70397229
chr6 88183311 88183321 MNX1 JASPAR yes 88180341 2970 70397230
chr6 88183311 88183323 MEF2A JASPAR yes 88180341 2970 70397231
chr6 88183311 88183323 MEF2B JASPAR yes 88180341 2970 70397232
chr6 88183311 88183323 MEF2D JASPAR yes 88180341 2970 70397233
chr6 88183339 88183343 YY1 TRANSFAC yes 88180341 2998 70397234
chr6 88183359 88183365 ZNF354C JASPAR yes 88180341 3018 70397235
chr6 88183361 88183685 CEBPB UCSC Txn Factor no Conserved 88180341 3020 108540915
chr6 88183363 88183374 E2F6 JASPAR yes 88180341 3022 70397236
chr6 88183381 88183387 YY1 JASPAR yes 88180341 3040 70397237
chr6 88183381 88183401 TBX19 JASPAR yes 88180341 3040 70397238
chr6 88183383 88183399 T JASPAR yes 88180341 3042 70397239
chr6 88183401 88183413 FOXI1 JASPAR yes 88180341 3060 70397240
chr6 88183404 88183408 YY1 TRANSFAC yes 88180341 3063 70397241
chr6 88183406 88183418 FOXC2 JASPAR yes 88180341 3065 70397242
chr6 88183407 88183415 FOXO3 JASPAR yes 88180341 3066 70397243
chr6 88183413 88183423 HESX1 JASPAR yes 88180341 3072 70397244
chr6 88183413 88183423 LHX2 JASPAR yes 88180341 3072 70397245
chr6 88183413 88183423 RAX JASPAR yes 88180341 3072 70397246
chr6 88183414 88183422 LHX9 JASPAR yes 88180341 3073 70397247
chr6 88183414 88183422 SHOX JASPAR yes 88180341 3073 70397248
chr6 88183422 88183426 YY1 TRANSFAC yes 88180341 3081 70397249
chr6 88183439 88183449 HESX1 JASPAR yes 88180341 3098 70397250
chr6 88183439 88183449 LBX2 JASPAR yes 88180341 3098 70397251
chr6 88183439 88183449 MIXL1 JASPAR yes 88180341 3098 70397252
chr6 88183439 88183449 RAX JASPAR yes 88180341 3098 70397253
chr6 88183440 88183448 LHX9 JASPAR yes 88180341 3099 70397254
chr6 88183440 88183448 SHOX JASPAR yes 88180341 3099 70397255
chr6 88183455 88183468 SCRT2 JASPAR yes 88180341 3114 70397256
chr6 88183457 88183475 MAFF JASPAR yes 88180341 3116 70397257
chr6 88183459 88183470 NRL JASPAR yes 88180341 3118 70397258
chr6 88183459 88183474 MAFK JASPAR yes 88180341 3118 70397259
chr6 88183495 88183501 ZNF354C JASPAR yes 88180341 3154 70397260
chr6 88183516 88183520 YY1 TRANSFAC yes 88180341 3175 70397261
chr6 88183517 88183529 HNF1B JASPAR yes 88180341 3176 70397262
chr6 88183519 88183522 MYB TRANSFAC yes 88180341 3178 70397263
chr6 88183530 88183541 CEBPA JASPAR yes 88180341 3189 70397264
chr6 88183531 88183542 CEBPB JASPAR yes 88180341 3190 70397265
chr6 88183534 88183538 LFA1 TRANSFAC yes 88180341 3193 70397266
chr6 88183559 88183569 SP1 JASPAR yes 88180341 3218 70397267
chr6 88183560 88183568 EHF JASPAR yes 88180341 3219 70397268
chr6 88183590 88183606 POU4F3 JASPAR yes 88180341 3249 70397269
chr6 88183591 88183602 FOXB1 JASPAR yes 88180341 3250 70397270
chr6 88183591 88183602 FOXC1 JASPAR yes 88180341 3250 70397271
chr6 88183591 88183603 FOXC2 JASPAR yes 88180341 3250 70397272
chr6 88183594 88183608 POU4F1 JASPAR yes 88180341 3253 70397273
chr6 88183594 88183610 POU4F3 JASPAR yes 88180341 3253 70397274
chr6 88183600 88183605 MYB TRANSFAC yes 88180341 3259 70397275
chr6 88183608 88183616 FOXL1 JASPAR yes 88180341 3267 70397276
chr6 88183615 88183620 ETS2 TRANSFAC yes 88180341 3274 70397277
chr6 88183625 88183642 BCL6B JASPAR yes 88180341 3284 70397278
SNPs associated with SLC35A1[ENSG00000164414.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 88383880 rs2754248 T C 161826 Esophagus 0.000116022 9175579
chr6 88192566 rs796567494 TG T 0 Esophagus 0.00101601 9174885
chr6 88366868 rs13198372 T C 144814 Heart 0.03921 9175442
chr6 88625902 rs76335026 G A 403848 Pancreas 0.392473 9177689
chr6 87210036 rs9444415 G A,T 970305 Ovary 0.328673 9172093
chr6 88195498 rs2300904 A T 0 Thyroid 0.000928677 9174929
Details of SLC35A1[ENSG00000164414.12]
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Genomic Location chr6:88180341-88222054[+]
TSS 88180341
Gene Name SLC35A1
Ensembl ID ENSG00000164414.12
ENTREZID 10559
Uniprot
P78382
Protein Name
CMP-sialic acid transporter
Mutated CMP-sialic acid transporter A1
Expression levels of SLC35A1[ENSG00000164414.12]
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