EnhancerDB
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Enhancers that regulate SFXN1[ENSG00000164466.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 174798965 174816415 enh38688 174904065 87650
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr5 174822422 174826670 enh90351 174904065 77395
Prostate (RWPE1)
chr5 174839645 174847555 enh84045 174904065 56510
Prostate (PC-3) Brain (SK-N-MC) Epithelial (MCF-7)
chr5 174859905 174865674 enh72125 174904065 38391
Neural Stem Cells (H9)
chr5 174885245 174896202 enh63492 174904065 7863
Brain (SK-N-MC) Prostate (RWPE1) Esophagus Peripheral Blood (MM.1S) Blood (T-cell) Epithelial (MCF-7)
chr5 174906234 174906555 vista50279 174904065 2169
VISTA
chr5 174909225 174914955 enh38689 174904065 5160
Astrocyte Brain (SK-N-SH)
chr5 174919325 174924111 enh38690 174904065 15260
Astrocyte Cervix (HeLa-S3) Prostate (RWPE1)
chr5 174924425 174931235 enh97810 174904065 20360
Brain (SK-N-MC) Epithelial (MCF-7)
chr5 174942165 174947115 enh97811 174904065 38100
Blood (T-cell) Epithelial (MCF-7)
chr5 174959145 174978169 enh72126 174904065 55080
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Blood (T-cell) Brain (SK-N-MC)
chr5 174975764 174976154 vista50280 174904065 71699
VISTA
chr5 174981614 174987115 enh72127 174904065 77549
Peripheral Blood (MM.1S) Neural Stem Cells (H9)
chr5 174994145 175005395 enh49013 174904065 90080
Large Intestine Spleen Neural Stem Cells (H9) Thymus Heart
Transcript facotrs that regulate SFXN1[ENSG00000164466.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 174905311 174906482 POLR2A UCSC Txn Factor no Conserved 174904065 1246 108537677
chr5 174905440 174906293 PHF8 UCSC Txn Factor no Conserved 174904065 1375 108537678
chr5 174906242 174906245 MYB TRANSFAC yes 174904065 2177 70768699
chr5 174906246 174906255 THAP1 JASPAR yes 174904065 2181 70768700
chr5 174906256 174906270 FOXF2 JASPAR yes 174904065 2191 70768701
chr5 174906257 174906268 FOXH1 JASPAR yes 174904065 2192 70768702
chr5 174906257 174906268 HOXA10 JASPAR yes 174904065 2192 70768703
chr5 174906258 174906267 CDX1 JASPAR yes 174904065 2193 70768704
chr5 174906258 174906268 HOXA13 JASPAR yes 174904065 2193 70768705
chr5 174906259 174906270 FOXP2 JASPAR yes 174904065 2194 70768706
chr5 174906259 174906271 FOXI1 JASPAR yes 174904065 2194 70768707
chr5 174906273 174906281 ISL2 JASPAR yes 174904065 2208 70768708
chr5 174906283 174906294 USF1 JASPAR yes 174904065 2218 70768709
chr5 174906283 174906294 USF2 JASPAR yes 174904065 2218 70768710
chr5 174906296 174906300 H4TF2 TRANSFAC yes 174904065 2231 70768711
chr5 174906313 174906324 ELK4 JASPAR yes 174904065 2248 70768712
chr5 174906314 174906324 ELK1 JASPAR yes 174904065 2249 70768713
chr5 174906314 174906324 GABPA JASPAR yes 174904065 2249 70768714
chr5 174906314 174906327 ELF1 JASPAR yes 174904065 2249 70768715
chr5 174906316 174906322 ETS1 JASPAR yes 174904065 2251 70768716
chr5 174906316 174906322 SPI1 JASPAR yes 174904065 2251 70768717
chr5 174906316 174906326 ELK1 JASPAR yes 174904065 2251 70768718
chr5 174906340 174906351 FOXA1 JASPAR yes 174904065 2275 70768719
chr5 174906349 174906353 TEAD2 TRANSFAC yes 174904065 2284 70768720
chr5 174906349 174906360 FOXH1 JASPAR yes 174904065 2284 70768721
chr5 174906350 174906358 RHOXF1 JASPAR yes 174904065 2285 70768722
chr5 174906353 174906359 ZNF354C JASPAR yes 174904065 2288 70768723
chr5 174906392 174906403 ESRRA JASPAR yes 174904065 2327 70768724
chr5 174906392 174906403 ESRRB JASPAR yes 174904065 2327 70768725
chr5 174906392 174906405 NR2F1 JASPAR yes 174904065 2327 70768726
chr5 174906394 174906402 NR4A2 JASPAR yes 174904065 2329 70768727
chr5 174906396 174906400 ESR1 TRANSFAC yes 174904065 2331 70768728
chr5 174906400 174906413 ZBTB18 JASPAR yes 174904065 2335 70768729
chr5 174906401 174906411 MSC JASPAR yes 174904065 2336 70768730
chr5 174906409 174906415 YY1 JASPAR yes 174904065 2344 70768731
chr5 174906421 174906432 ESRRB JASPAR yes 174904065 2356 70768732
chr5 174906426 174906432 YY1 JASPAR yes 174904065 2361 70768733
chr5 174906439 174906453 FOXF2 JASPAR yes 174904065 2374 70768734
chr5 174906440 174906451 HOXC11 JASPAR yes 174904065 2375 70768735
chr5 174906440 174906451 HOXC12 JASPAR yes 174904065 2375 70768736
chr5 174906440 174906451 HOXD12 JASPAR yes 174904065 2375 70768737
chr5 174906441 174906451 HOXC10 JASPAR yes 174904065 2376 70768738
chr5 174906441 174906451 HOXD11 JASPAR yes 174904065 2376 70768739
chr5 174906471 174906476 ETS2 TRANSFAC yes 174904065 2406 70768740
chr5 174906484 174906488 NFE TRANSFAC yes 174904065 2419 70768741
chr5 174906495 174906512 RXRA JASPAR yes 174904065 2430 70768742
chr5 174906496 174906516 RREB1 JASPAR yes 174904065 2431 70768743
chr5 174906497 174906507 ZNF740 JASPAR yes 174904065 2432 70768744
chr5 174906498 174906518 RREB1 JASPAR yes 174904065 2433 70768745
chr5 174906499 174906513 PLAG1 JASPAR yes 174904065 2434 70768746
chr5 174906499 174906519 RREB1 JASPAR yes 174904065 2434 70768747
chr5 174906500 174906520 RREB1 JASPAR yes 174904065 2435 70768748
chr5 174906500 174906521 ZNF263 JASPAR yes 174904065 2435 70768749
chr5 174906501 174906511 SP1 JASPAR yes 174904065 2436 70768750
chr5 174906501 174906521 RREB1 JASPAR yes 174904065 2436 70768751
chr5 174906502 174906512 SP1 JASPAR yes 174904065 2437 70768752
chr5 174906505 174906515 ZNF740 JASPAR yes 174904065 2440 70768753
chr5 174906506 174906526 RREB1 JASPAR yes 174904065 2441 70768754
chr5 174906507 174906517 ZNF740 JASPAR yes 174904065 2442 70768755
chr5 174906507 174906521 PLAG1 JASPAR yes 174904065 2442 70768756
chr5 174906520 174906526 LEF1 TRANSFAC yes 174904065 2455 70768757
chr5 174906520 174906526 SOX10 JASPAR yes 174904065 2455 70768758
chr5 174906525 174906528 MYB TRANSFAC yes 174904065 2460 70768759
SNPs associated with SFXN1[ENSG00000164466.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 175050641 rs183765296 T A,C 93896 Esophagus 0.565692 8724706
chr5 174628287 rs62388658 C T 275778 Pancreas 0.14229 8721784
chr5 174860411 rs265971 C T 43654 Ovary 0.395463 8723118
chr5 173967680 rs60664019 A G 936385 Uterus 0.212235 8718542
chr5 174663172 rs116652049 A G 240893 Liver 0.414306 8721984
chr5 174895622 rs72815470 T A 8443 Stomach 0.259812 8723371
Details of SFXN1[ENSG00000164466.8]
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Genomic Location chr5:174904065-174956745[+]
TSS 174904065
Gene Name SFXN1
Ensembl ID ENSG00000164466.8
ENTREZID 94081
Uniprot
Q9H9B4
Protein Name
Sideroflexin-1
Expression levels of SFXN1[ENSG00000164466.8]
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