EnhancerDB
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Enhancers that regulate CDC40[ENSG00000168438.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 110403145 110407310 enh95723 110501344 94034
Ovary
chr6 110415658 110415810 vista53089 110501344 85534
VISTA
chr6 110416105 110420885 enh23502 110501344 80459
Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Lung Muscle (A673) Placenta Muscle (Myoblast) Spleen Neural Stem Cells (H9) Heart
chr6 110418117 110418342 vista53090 110501344 83002
VISTA
chr6 110442105 110447695 enh9314 110501344 53649
Blood (Karpas-422)
chr6 110456590 110456951 vista53091 110501344 44393
VISTA
chr6 110459921 110464297 enh59675 110501344 37047
Skin (Keratinocyte) Pancreas (Panc1)
chr6 110491405 110496975 enh77995 110501344 4369
Muscle (A673)
chr6 110502951 110503352 vista53092 110501344 1607
VISTA
chr6 110520405 110528150 enh9315 110501344 19061
Blood (OCI-LY7) Blood (Karpas-422)
chr6 110559225 110563375 enh91714 110501344 57881
Bone Marrow (K562)
chr6 110586325 110593640 enh72449 110501344 84981
Muscle (A673) Neural Stem Cells (H9)
Transcript facotrs that regulate CDC40[ENSG00000168438.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 110496360 110496375 JUND JASPAR yes 110501344 4969 104277159
chr6 110496361 110496374 JUN JASPAR yes 110501344 4970 104277160
chr6 110496362 110496376 ATF7 JASPAR yes 110501344 4968 104277161
chr6 110496363 110496375 JDP2 JASPAR yes 110501344 4969 104277162
chr6 110496363 110496378 JUND JASPAR yes 110501344 4966 104277163
chr6 110496364 110496377 JUN JASPAR yes 110501344 4967 104277164
chr6 110496365 110496373 CREB1 JASPAR yes 110501344 4971 104277165
chr6 110496365 110496375 RORA JASPAR yes 110501344 4969 104277166
chr6 110496385 110496390 ETS2 TRANSFAC yes 110501344 4954 104277167
chr6 110496390 110496396 TBP TRANSFAC yes 110501344 4948 104277168
chr6 110496415 110496420 GATA2 JASPAR yes 110501344 4924 104277169
chr6 110496429 110496435 TCF1 TRANSFAC yes 110501344 4909 104277170
chr6 110496462 110496466 H1TF2 TRANSFAC yes 110501344 4878 104277171
chr6 110496462 110496466 NFE TRANSFAC yes 110501344 4878 104277172
chr6 110496462 110496466 SRF TRANSFAC yes 110501344 4878 104277173
chr6 110496462 110496468 NFYC TRANSFAC yes 110501344 4876 104277174
chr6 110496476 110496488 FOXC2 JASPAR yes 110501344 4856 104277175
chr6 110496477 110496482 ETS2 TRANSFAC yes 110501344 4862 104277176
chr6 110496483 110496489 SOX10 JASPAR yes 110501344 4855 104277177
chr6 110496484 110496495 FOXA1 JASPAR yes 110501344 4849 104277178
chr6 110496486 110496491 ETS2 TRANSFAC yes 110501344 4853 104277179
chr6 110496488 110496497 SRY JASPAR yes 110501344 4847 104277180
chr6 110496518 110496525 MEIS1 JASPAR yes 110501344 4819 104277181
chr6 110496532 110496547 MEF2A JASPAR yes 110501344 4797 104277182
chr6 110496533 110496548 MEF2C JASPAR yes 110501344 4796 104277183
chr6 110496534 110496546 MEF2A JASPAR yes 110501344 4798 104277184
chr6 110496534 110496546 MEF2B JASPAR yes 110501344 4798 104277185
chr6 110496534 110496546 MEF2D JASPAR yes 110501344 4798 104277186
chr6 110496535 110496545 MEF2A JASPAR yes 110501344 4799 104277187
chr6 110496536 110496540 YY1 TRANSFAC yes 110501344 4804 104277188
chr6 110496539 110496554 HNF1A JASPAR yes 110501344 4790 104277189
chr6 110496540 110496553 HNF1B JASPAR yes 110501344 4791 104277190
chr6 110496543 110496558 STAT2 JASPAR yes 110501344 4786 104277191
chr6 110496548 110496563 FOXP1 JASPAR yes 110501344 4781 104277192
chr6 110496549 110496560 FOXA1 JASPAR yes 110501344 4784 104277193
chr6 110496549 110496564 FOXA1 JASPAR yes 110501344 4780 104277194
chr6 110496550 110496562 FOXC2 JASPAR yes 110501344 4782 104277195
chr6 110496551 110496563 FOXI1 JASPAR yes 110501344 4781 104277196
chr6 110496561 110496572 DUX4 JASPAR yes 110501344 4772 104277197
chr6 110496562 110496582 RREB1 JASPAR yes 110501344 4762 104277198
chr6 110496568 110496583 MEF2C JASPAR yes 110501344 4761 104277199
chr6 110496578 110496581 MYB TRANSFAC yes 110501344 4763 104277200
chr6 110496595 110496601 TBP TRANSFAC yes 110501344 4743 104277201
chr6 110496618 110496628 MAX JASPAR yes 110501344 4716 104277202
chr6 110496618 110496630 HES5 JASPAR yes 110501344 4714 104277203
chr6 110496618 110496630 HES7 JASPAR yes 110501344 4714 104277204
chr6 110496619 110496629 BHLHE40 JASPAR yes 110501344 4715 104277205
chr6 110496619 110496629 BHLHE41 JASPAR yes 110501344 4715 104277206
chr6 110496619 110496629 CLOCK JASPAR yes 110501344 4715 104277207
chr6 110496619 110496629 HEY1 JASPAR yes 110501344 4715 104277208
chr6 110496619 110496629 HEY2 JASPAR yes 110501344 4715 104277209
chr6 110496619 110496629 MAX JASPAR yes 110501344 4715 104277210
chr6 110496619 110496629 MNT JASPAR yes 110501344 4715 104277211
chr6 110496619 110496629 TFE3 JASPAR yes 110501344 4715 104277212
chr6 110496621 110496626 MYC TRANSFAC yes 110501344 4718 104277213
chr6 110496621 110496626 USF1 TRANSFAC yes 110501344 4718 104277214
chr6 110496621 110496626 USF2 TRANSFAC yes 110501344 4718 104277215
chr6 110496621 110496631 TBX21 JASPAR yes 110501344 4713 104277216
chr6 110496621 110496632 TBX2 JASPAR yes 110501344 4712 104277217
chr6 110496621 110496634 EOMES JASPAR yes 110501344 4710 104277218
chr6 110496622 110496630 MGA JASPAR yes 110501344 4714 104277219
chr6 110496622 110496630 TBX1 JASPAR yes 110501344 4714 104277220
chr6 110496622 110496632 TBR1 JASPAR yes 110501344 4712 104277221
chr6 110496638 110496656 IRF2 JASPAR yes 110501344 4688 104277222
chr6 110496639 110496660 IRF1 JASPAR yes 110501344 4684 104277223
chr6 110496641 110496656 PRDM1 JASPAR yes 110501344 4688 104277224
chr6 110496641 110496656 STAT2 JASPAR yes 110501344 4688 104277225
chr6 110496642 110496656 SPIC JASPAR yes 110501344 4688 104277226
chr6 110496642 110496656 STAT1 JASPAR yes 110501344 4688 104277227
chr6 110496643 110496657 IRF7 JASPAR yes 110501344 4687 104277228
chr6 110496643 110496657 IRF8 JASPAR yes 110501344 4687 104277229
chr6 110496643 110496658 IRF9 JASPAR yes 110501344 4686 104277230
chr6 110496662 110496666 H4TF2 TRANSFAC yes 110501344 4678 104277231
chr6 110496674 110496680 HiNF-A TRANSFAC yes 110501344 4664 104277232
chr6 110496678 110496691 JUN JASPAR yes 110501344 4653 104277233
chr6 110496705 110496708 MYB TRANSFAC yes 110501344 4636 104277234
chr6 110496761 110496766 GATA1 TRANSFAC yes 110501344 4578 104277235
chr6 110496771 110496781 HOXB13 JASPAR yes 110501344 4563 104277236
chr6 110496772 110496784 FOXI1 JASPAR yes 110501344 4560 104277237
chr6 110496772 110496787 MEF2C JASPAR yes 110501344 4557 104277238
chr6 110496773 110496785 MEF2B JASPAR yes 110501344 4559 104277239
chr6 110496775 110496779 YY1 TRANSFAC yes 110501344 4565 104277240
chr6 110496817 110496831 IRF7 JASPAR yes 110501344 4513 104277241
chr6 110496822 110496826 YY1 TRANSFAC yes 110501344 4518 104277242
chr6 110496827 110496831 TEAD2 TRANSFAC yes 110501344 4513 104277243
chr6 110496869 110496873 YY1 TRANSFAC yes 110501344 4471 104277244
chr6 110496870 110496878 FEV JASPAR yes 110501344 4466 104277245
chr6 110496872 110496877 ETS2 TRANSFAC yes 110501344 4467 104277246
chr6 110496887 110496905 TP53 JASPAR yes 110501344 4439 104277247
chr6 110496887 110496905 TP63 JASPAR yes 110501344 4439 104277248
chr6 110496896 110496899 MYB TRANSFAC yes 110501344 4445 104277249
chr6 110496903 110496917 RORA JASPAR yes 110501344 4427 104277250
chr6 110502956 110502960 NFE TRANSFAC yes 110501344 1612 70415974
chr6 110502957 110502962 GATA2 JASPAR yes 110501344 1613 70415975
chr6 110502958 110502972 EBF1 JASPAR yes 110501344 1614 70415976
chr6 110502960 110502971 EBF1 JASPAR yes 110501344 1616 70415977
chr6 110502975 110502979 NFE TRANSFAC yes 110501344 1631 70415978
chr6 110503003 110503008 MYC TRANSFAC yes 110501344 1659 70415979
chr6 110503018 110503024 YY1 JASPAR yes 110501344 1674 70415980
chr6 110503018 110503029 USF1 JASPAR yes 110501344 1674 70415981
chr6 110503056 110503060 YY1 TRANSFAC yes 110501344 1712 70415982
chr6 110503056 110503077 IRF1 JASPAR yes 110501344 1712 70415983
chr6 110503058 110503073 STAT2 JASPAR yes 110501344 1714 70415984
chr6 110503059 110503073 SPI1 JASPAR yes 110501344 1715 70415985
chr6 110503059 110503073 STAT1 JASPAR yes 110501344 1715 70415986
chr6 110503062 110503069 SPIB JASPAR yes 110501344 1718 70415987
chr6 110503075 110503090 PRDM1 JASPAR yes 110501344 1731 70415988
chr6 110503077 110503098 IRF1 JASPAR yes 110501344 1733 70415989
chr6 110503082 110503100 IRF2 JASPAR yes 110501344 1738 70415990
chr6 110503083 110503104 IRF1 JASPAR yes 110501344 1739 70415991
chr6 110503085 110503100 STAT2 JASPAR yes 110501344 1741 70415992
chr6 110503087 110503099 IRF1 JASPAR yes 110501344 1743 70415993
chr6 110503105 110503123 MAFF JASPAR yes 110501344 1761 70415994
chr6 110503106 110503121 MAFK JASPAR yes 110501344 1762 70415995
chr6 110503124 110503128 H1TF2 TRANSFAC yes 110501344 1780 70415996
chr6 110503124 110503128 NFE TRANSFAC yes 110501344 1780 70415997
chr6 110503124 110503128 SRF TRANSFAC yes 110501344 1780 70415998
chr6 110503124 110503132 DLX6 JASPAR yes 110501344 1780 70415999
chr6 110503124 110503132 MSX2 JASPAR yes 110501344 1780 70416000
chr6 110503129 110503133 YY1 TRANSFAC yes 110501344 1785 70416001
chr6 110503130 110503148 IRF2 JASPAR yes 110501344 1786 70416002
chr6 110503131 110503152 IRF1 JASPAR yes 110501344 1787 70416003
chr6 110503133 110503148 PRDM1 JASPAR yes 110501344 1789 70416004
chr6 110503153 110503164 NFKB1 JASPAR yes 110501344 1809 70416005
chr6 110503163 110503178 HNF4A JASPAR yes 110501344 1819 70416006
chr6 110503164 110503179 HNF4G JASPAR yes 110501344 1820 70416007
chr6 110503187 110503197 TEAD1 JASPAR yes 110501344 1843 70416008
chr6 110503187 110503197 TEAD4 JASPAR yes 110501344 1843 70416009
chr6 110503187 110503198 FOXH1 JASPAR yes 110501344 1843 70416010
chr6 110503187 110503199 TEAD1 JASPAR yes 110501344 1843 70416011
chr6 110503188 110503196 TEAD3 JASPAR yes 110501344 1844 70416012
chr6 110503201 110503222 ZNF263 JASPAR yes 110501344 1857 70416013
chr6 110503235 110503253 ESR2 JASPAR yes 110501344 1891 70416014
chr6 110503250 110503255 MYC TRANSFAC yes 110501344 1906 70416015
chr6 110503302 110503313 TFAP2A JASPAR yes 110501344 1958 70416016
chr6 110503316 110503325 ZEB1 JASPAR yes 110501344 1972 70416017
chr6 110503317 110503327 TCF4 JASPAR yes 110501344 1973 70416018
chr6 110503319 110503324 USF2 TRANSFAC yes 110501344 1975 70416019
chr6 110503322 110503334 HINFP JASPAR yes 110501344 1978 70416020
chr6 110503323 110503328 TFAP2A TRANSFAC yes 110501344 1979 70416021
chr6 110503323 110503329 MZF1 JASPAR yes 110501344 1979 70416022
chr6 110503324 110503335 ESRRA JASPAR yes 110501344 1980 70416023
chr6 110503333 110503338 GATA2 JASPAR yes 110501344 1989 70416024
chr6 110503340 110503347 NKX3-1 JASPAR yes 110501344 1996 70416025
SNPs associated with CDC40[ENSG00000168438.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 110526285 rs575478937 G GT 0 Esophagus 0.265955 9256291
chr6 110692360 rs9386891 C A 116882 Pancreas 0.0792476 9257123
chr6 110268192 rs9386864 C T 233152 Spleen 0.196465 9255421
chr6 110675587 rs149547887 C A 100109 Uterus 0.477041 9257045
chr6 111009431 rs141603080 A C 433953 Thyroid 0.166257 9259086
chr6 110946339 rs139429326 G A 370861 Lung 0.147504 9258706
Details of CDC40[ENSG00000168438.10]
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Genomic Location chr6:110501344-110575478[+]
TSS 110501344
Gene Name CDC40
Ensembl ID ENSG00000168438.10
ENTREZID 51362
Uniprot
O60508
Protein Name
CDC40 protein
Cell division cycle 40 homolog
Pre-mRNA-processing factor 17
Expression levels of CDC40[ENSG00000168438.10]
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