EnhancerDB
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  3. RND1[ENSG00000172602.5]
Enhancers that regulate RND1[ENSG00000172602.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 49171689 49175995 enh14694 49259681 83686
Placenta Brain (SK-N-SH) Heart
chr12 49186725 49193019 enh14695 49259681 66662
Esophagus Placenta
chr12 49198499 49198542 vista13314 49259681 61139
VISTA
chr12 49202965 49210275 enh98963 49259681 49406
Uterus
chr12 49203713 49203966 vista13315 49259681 55715
VISTA
chr12 49267159 49267283 vista13316 49259681 7478
VISTA
chr12 49273705 49285739 enh29564 49259681 14024
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
chr12 49276307 49276420 vista13317 49259681 16626
VISTA
chr12 49277442 49277626 vista13318 49259681 17761
VISTA
chr12 49299145 49303335 enh87960 49259681 39464
Pancreas Liver (HepG2)
chr12 49324785 49332435 enh47579 49259681 65104
Spleen Thymus Blood (T-cell)
chr12 49338845 49343755 enh101301 49259681 79164
Stomach Thyroid Lung (PC-9)
Transcript facotrs that regulate RND1[ENSG00000172602.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 49262634 49270682 ZBTB33 GTRD no Lung (A549) 49259681 2953 108029479
chr12 49262662 49268408 ZBTB33 GTRD no Lung (A549) 49259681 2981 108029480
chr12 49262666 49269324 ZNF274 GTRD no Bone Marrow (K562) 49259681 2985 108029481
chr12 49262682 49268293 ZNF274 GTRD no Bone Marrow (K562) 49259681 3001 108029482
chr12 49263037 49267504 ZNF143 GTRD no Epithelial (MCF-7) 49259681 3356 108029483
chr12 49263249 49269637 ZBTB33 GTRD no Lung (A549) 49259681 3568 108029484
chr12 49263414 49267814 ZNF274 GTRD no Bone Marrow (K562) 49259681 3733 108029485
chr12 49263717 49267880 ZBTB33 GTRD no Lung (A549) 49259681 4036 108029486
chr12 49263800 49267961 ZNF143 GTRD no Epithelial (MCF-7) 49259681 4119 108029487
chr12 49264078 49268327 ZBTB33 GTRD no Lung (A549) 49259681 4397 108029488
chr12 49264106 49268237 ZNF274 GTRD no Liver (HepG2) 49259681 4425 108029489
chr12 49264129 49268025 ZNF143 GTRD no Epithelial (MCF-7) 49259681 4448 108029490
chr12 49264136 49268305 ZBTB33 GTRD no Lung (A549) 49259681 4455 108029491
chr12 49264145 49267421 ZBTB33 GTRD no Lung (A549) 49259681 4464 108029492
chr12 49264146 49268475 ZNF143 GTRD no Epithelial (MCF-7) 49259681 4465 108029493
chr12 49264167 49267815 ZNF274 GTRD no Liver (HepG2) 49259681 4486 108029494
chr12 49264203 49267537 ZNF274 GTRD no Bone Marrow (K562) 49259681 4522 108029495
chr12 49264203 49268318 ZBTB33 GTRD no Lung (A549) 49259681 4522 108029496
chr12 49264211 49268275 ZBTB33 GTRD no Lung (A549) 49259681 4530 108029497
chr12 49264215 49267482 ZNF274 GTRD no Bone Marrow (K562) 49259681 4534 108029498
chr12 49264306 49267238 ZNF143 GTRD no Epithelial (MCF-7) 49259681 4625 108029499
chr12 49264335 49268247 ZNF143 GTRD no Epithelial (MCF-7) 49259681 4654 108029500
SNPs associated with RND1[ENSG00000172602.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 50246812 rs11169181 C T 987131 Esophagus 0.312322 2623312
chr12 50019368 rs77938251 A T 759687 Esophagus 0.2435 2622169
chr12 49634594 rs11168932 T G 374913 Heart 0.199301 2619887
chr12 50248288 rs114545729 C G,T 988607 Uterus 0.11402 2623336
chr12 49190992 rs7975385 T C 59936 Thyroid 0.264551 2618091
Details of RND1[ENSG00000172602.5]
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Genomic Location chr12:49250928-49259681[-]
TSS 49259681
Gene Name RND1
Ensembl ID ENSG00000172602.5
ENTREZID 27289
Uniprot
Q92730
Protein Name
Rho-related GTP-binding protein Rho6
Expression levels of RND1[ENSG00000172602.5]
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