EnhancerDB
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Enhancers that regulate EFCAB13[ENSG00000178852.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 45298385 45310955 enh4443 45400656 89701
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Stomach Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Heart
chr17 45302836 45303175 vista24970 45400656 97481
VISTA
chr17 45315025 45325755 enh4444 45400656 74901
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Breast Uterus Heart
chr17 45317390 45317724 vista24971 45400656 82932
VISTA
chr17 45329205 45337610 enh32214 45400656 63046
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Uterus
chr17 45333109 45333278 vista24972 45400656 67378
VISTA
chr17 45341385 45347815 enh32215 45400656 52841
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Uterus Stomach
chr17 45343380 45343597 vista24973 45400656 57059
VISTA
chr17 45344750 45345107 vista24974 45400656 55549
VISTA
chr17 45349694 45360075 enh4445 45400656 40581
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Heart
chr17 45352964 45353080 vista24975 45400656 47576
VISTA
chr17 45356357 45357027 vista24976 45400656 43629
VISTA
chr17 45368528 45369514 vista697 45400656 31142
VISTA
chr17 45370485 45375395 enh99423 45400656 25261
Uterus Stomach
chr17 45379685 45384455 enh32216 45400656 16201
Astrocyte Lung (PC-9)
chr17 45387405 45395444 enh17193 45400656 5212
Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
Transcript facotrs that regulate EFCAB13[ENSG00000178852.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with EFCAB13[ENSG00000178852.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 45374795 rs7220606 A G 25861 Esophagus 2.47448e-21 4904293
chr17 45374795 rs7220606 A G 25861 Esophagus 3.3106e-16 4904293
chr17 45374994 rs7221196 G A 25662 Esophagus 1.95406e-13 4904297
chr17 45401335 rs118099962 T C 0 Heart 0.000414392 4904475
chr17 45401335 rs118099962 T C 0 Heart 0.000532309 4904475
chr17 45374994 rs7221196 G A 25662 Pancreas 4.99079e-17 4904297
chr17 45374795 rs7220606 A G 25861 Breast 6.05879e-09 4904293
chr17 45401335 rs118099962 T C 0 Spleen 0.000541453 4904475
chr17 45374994 rs7221196 G A 25662 Ovary 3.46158e-12 4904297
chr17 45374994 rs7221196 G A 25662 Uterus 1.51801e-07 4904297
chr17 45401335 rs118099962 T C 0 Thyroid 9.69818e-08 4904475
chr17 45374994 rs7221196 G A 25662 Lung 1.99382e-23 4904297
chr17 45374795 rs7220606 A G 25861 Stomach 1.23975e-15 4904293
chr17 45374795 rs7220606 A G 25861 Adrenal 6.5672e-19 4904293
Details of EFCAB13[ENSG00000178852.11]
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Genomic Location chr17:45400656-45518678[+]
TSS 45400656
Gene Name EFCAB13
Ensembl ID ENSG00000178852.11
ENTREZID 124989
Uniprot
Q8IY85
Protein Name
EF-hand calcium-binding domain-containing protein 13
Expression levels of EFCAB13[ENSG00000178852.11]
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