EnhancerDB
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Enhancers that regulate VARS[ENSG00000204394.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 31700565 31706295 enh100495 31763730 57435
Cervix (HeLa-S3) Uterus Bone (Osteoblast)
chr6 31702368 31703528 vista51574 31763730 60202
VISTA
chr6 31705604 31706142 vista51575 31763730 57588
VISTA
chr6 31712865 31717115 enh93489 31763730 46615
Liver (HepG2)
chr6 31732185 31737135 enh23152 31763730 26595
Placenta
chr6 31761868 31762215 vista51576 31763730 1515
VISTA
chr6 31789098 31789184 vista51577 31763730 25368
VISTA
chr6 31789672 31790268 vista51578 31763730 25942
VISTA
chr6 31793065 31797215 enh100496 31763730 29335
Uterus
chr6 31813405 31817555 enh55711 31763730 49675
Large Intestine
chr6 31840145 31844295 enh109037 31763730 76415
Lung (PC-9)
Transcript facotrs that regulate VARS[ENSG00000204394.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 31761791 31764120 POLR2A UCSC Txn Factor no Conserved 31763730 390 108539625
chr6 31761868 31761883 FOXP1 JASPAR yes 31763730 1847 70346378
chr6 31761869 31761884 FOXP1 JASPAR yes 31763730 1846 70346379
chr6 31761869 31761890 IRF1 JASPAR yes 31763730 1840 70346380
chr6 31761870 31761885 FOXP1 JASPAR yes 31763730 1845 70346381
chr6 31761870 31761891 IRF1 JASPAR yes 31763730 1839 70346382
chr6 31761871 31761886 FOXP1 JASPAR yes 31763730 1844 70346383
chr6 31761871 31761892 IRF1 JASPAR yes 31763730 1838 70346384
chr6 31761872 31761887 FOXP1 JASPAR yes 31763730 1843 70346385
chr6 31761872 31761893 IRF1 JASPAR yes 31763730 1837 70346386
chr6 31761873 31761888 FOXP1 JASPAR yes 31763730 1842 70346387
chr6 31761873 31761894 IRF1 JASPAR yes 31763730 1836 70346388
chr6 31761874 31761889 FOXP1 JASPAR yes 31763730 1841 70346389
chr6 31761876 31761891 FOXP1 JASPAR yes 31763730 1839 70346390
chr6 31761877 31761898 IRF1 JASPAR yes 31763730 1832 70346391
chr6 31761878 31761893 FOXP1 JASPAR yes 31763730 1837 70346392
chr6 31761878 31761899 IRF1 JASPAR yes 31763730 1831 70346393
chr6 31761882 31761903 IRF1 JASPAR yes 31763730 1827 70346394
chr6 31761883 31761898 FOXP1 JASPAR yes 31763730 1832 70346395
chr6 31761883 31761904 IRF1 JASPAR yes 31763730 1826 70346396
chr6 31761887 31761902 STAT2 JASPAR yes 31763730 1828 70346397
chr6 31761888 31761903 FOXP1 JASPAR yes 31763730 1827 70346398
chr6 31761892 31761913 IRF1 JASPAR yes 31763730 1817 70346399
chr6 31761920 31761931 NFKB1 JASPAR yes 31763730 1799 70346400
chr6 31761920 31761935 HSF1 JASPAR yes 31763730 1795 70346401
chr6 31761921 31761931 RELA JASPAR yes 31763730 1799 70346402
chr6 31761945 31761949 YY1 TRANSFAC yes 31763730 1781 70346403
chr6 31761946 31761956 HOXB13 JASPAR yes 31763730 1774 70346404
chr6 31761947 31761959 FOXI1 JASPAR yes 31763730 1771 70346405
chr6 31761950 31761954 YY1 TRANSFAC yes 31763730 1776 70346406
chr6 31761951 31761963 FOXI1 JASPAR yes 31763730 1767 70346407
chr6 31761996 31762002 GATA3 JASPAR yes 31763730 1728 70346408
chr6 31762020 31762040 TP63 JASPAR yes 31763730 1690 70346409
chr6 31762030 31762043 SMAD2 JASPAR yes 31763730 1687 70346410
chr6 31762068 31762078 NFATC3 JASPAR yes 31763730 1652 70346411
chr6 31762069 31762076 NFATC2 JASPAR yes 31763730 1654 70346412
chr6 31762075 31762085 TFEB JASPAR yes 31763730 1645 70346413
chr6 31762075 31762085 TFEC JASPAR yes 31763730 1645 70346414
chr6 31762075 31762086 USF2 JASPAR yes 31763730 1644 70346415
chr6 31762104 31762118 TCF7L2 JASPAR yes 31763730 1612 70346416
chr6 31762105 31762119 RXRB JASPAR yes 31763730 1611 70346417
chr6 31762172 31762193 ZNF263 JASPAR yes 31763730 1537 70346418
chr6 31762175 31762190 PRDM1 JASPAR yes 31763730 1540 70346419
chr6 31762175 31762196 ZNF263 JASPAR yes 31763730 1534 70346420
chr6 31762176 31762197 ZNF263 JASPAR yes 31763730 1533 70346421
chr6 31762179 31762200 ZNF263 JASPAR yes 31763730 1530 70346422
chr6 31762187 31762201 SPI1 JASPAR yes 31763730 1529 70346423
chr6 31762187 31762201 SPIC JASPAR yes 31763730 1529 70346424
chr6 31762188 31762196 EHF JASPAR yes 31763730 1534 70346425
chr6 31762188 31762209 ZNF263 JASPAR yes 31763730 1521 70346426
chr6 31762191 31762212 IRF1 JASPAR yes 31763730 1518 70346427
chr6 31762191 31762212 ZNF263 JASPAR yes 31763730 1518 70346428
chr6 31762195 31762199 YY1 TRANSFAC yes 31763730 1531 70346429
chr6 31762198 31762213 PRDM1 JASPAR yes 31763730 1517 70346430
chr6 31762200 31762204 YY1 TRANSFAC yes 31763730 1526 70346431
SNPs associated with VARS[ENSG00000204394.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 31497018 rs201843783 G GA 248277 Breast 0.374191 8957972
chr6 32398975 rs4988822 C T 635245 Ovary 0.406371 8961422
chr6 31745284 rs2736426 C T 11 Stomach 0.313627 8959015
Details of VARS[ENSG00000204394.8]
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Genomic Location chr6:31745295-31763730[-]
TSS 31763730
Gene Name VARS
Ensembl ID ENSG00000204394.8
ENTREZID 7407
Uniprot
P26640
A0A024RCN6
Protein Name
VARS
Valine--tRNA ligase
Expression levels of VARS[ENSG00000204394.8]
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