Enhancers that regulate TNF[ENSG00000232810.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 31439905 31445779 enh38946 31543344 97565
chr6 31450941 31456208 enh46104 31543344 87136
chr6 31459645 31464975 enh9032 31543344 78369
chr6 31504605 31508755 enh9033 31543344 34589
chr6 31520845 31534030 enh9034 31543344 9314
chr6 31529822 31530211 vista51571 31543344 13133
chr6 31530961 31531387 vista51572 31543344 11957
chr6 31542399 31542828 vista51573 31543344 516

Transcript facotrs that regulate TNF[ENSG00000232810.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 31541841 31542805 POLR2A UCSC Txn Factor no Conserved 31543344 539 108539602
chr6 31542401 31542412 EBF1 JASPAR yes 31543344 932 70346081
chr6 31542405 31542410 TFAP2A TRANSFAC yes 31543344 934 70346082
chr6 31542405 31542411 MZF1 JASPAR yes 31543344 933 70346083
chr6 31542432 31542452 TP53 JASPAR yes 31543344 892 70346084
chr6 31542463 31542476 NFKB1 JASPAR yes 31543344 868 70346085
chr6 31542464 31542469 TFAP2A TRANSFAC yes 31543344 875 70346086
chr6 31542464 31542470 MZF1 JASPAR yes 31543344 874 70346087
chr6 31542464 31542475 NFKB1 JASPAR yes 31543344 869 70346088
chr6 31542464 31542477 NFKB1 JASPAR yes 31543344 867 70346089
chr6 31542464 31542477 NFKB2 JASPAR yes 31543344 867 70346090
chr6 31542465 31542476 NFKB1 JASPAR yes 31543344 868 70346091
chr6 31542466 31542477 NFKB1 JASPAR yes 31543344 867 70346092
chr6 31542468 31542482 GLIS3 JASPAR yes 31543344 862 70346093
chr6 31542469 31542479 ZNF740 JASPAR yes 31543344 865 70346094
chr6 31542478 31542481 MYB TRANSFAC yes 31543344 863 70346095
chr6 31542485 31542506 REST JASPAR yes 31543344 838 70346096
chr6 31542489 31542506 RARA JASPAR yes 31543344 838 70346097
chr6 31542490 31542941 RELA UCSC Txn Factor no Conserved 31543344 403 108539603
chr6 31542499 31542514 TFAP2C JASPAR yes 31543344 830 70346098
chr6 31542501 31542515 EBF1 JASPAR yes 31543344 829 70346099
chr6 31542501 31542516 TFAP2A JASPAR yes 31543344 828 70346100
chr6 31542502 31542513 EBF1 JASPAR yes 31543344 831 70346101
chr6 31542503 31542512 TFAP2A JASPAR yes 31543344 832 70346102
chr6 31542508 31542523 PRDM1 JASPAR yes 31543344 821 70346103
chr6 31542535 31542544 ZEB1 JASPAR yes 31543344 800 70346104
chr6 31542581 31542586 SP1 TRANSFAC yes 31543344 758 70346105
chr6 31542589 31542604 PRDM1 JASPAR yes 31543344 740 70346106
chr6 31542594 31542833 EBF1 UCSC Txn Factor no Conserved 31543344 511 108539604
chr6 31542630 31542635 ETS2 TRANSFAC yes 31543344 709 70346107
chr6 31542638 31542659 IRF1 JASPAR yes 31543344 685 70346108
chr6 31542657 31542661 YY1 TRANSFAC yes 31543344 683 70346109
chr6 31542672 31542676 ESR1 TRANSFAC yes 31543344 668 70346110
chr6 31542679 31542685 TCF4 TRANSFAC yes 31543344 659 70346111
chr6 31542694 31542700 NFE2 TRANSFAC yes 31543344 644 70346112
chr6 31542711 31542721 NFKB1 JASPAR yes 31543344 623 70346113
chr6 31542711 31542721 RELA JASPAR yes 31543344 623 70346114
chr6 31542727 31542732 H4TF1 TRANSFAC yes 31543344 612 70346115
chr6 31542736 31542745 TFAP2A JASPAR yes 31543344 599 70346116
chr6 31542739 31542752 NFKB2 JASPAR yes 31543344 592 70346117
chr6 31542740 31542750 NFKB1 JASPAR yes 31543344 594 70346118
chr6 31542740 31542751 NFKB1 JASPAR yes 31543344 593 70346119
chr6 31542743 31542763 TP53 JASPAR yes 31543344 581 70346120
chr6 31542744 31542748 NFE TRANSFAC yes 31543344 596 70346121
chr6 31542778 31542793 TFAP2A JASPAR yes 31543344 551 70346122
chr6 31542803 31542813 SP1 JASPAR yes 31543344 531 70346123

Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 31324664 rs9266184 T C,G 218680 Esophagus 0.329128 8956395
chr6 31320467 rs9468975 C T 222877 Esophagus 0.306758 8956070
chr6 30779527 rs62408722 G A 763817 Heart 0.258346 8949606
chr6 31318870 rs72502567 A G 224474 Heart 0.331404 8955953
chr6 32493870 rs545569357 G C 947757 Pancreas 0.189943 8961971
chr6 32440743 rs9357149 C T 894630 Breast 0.352742 8961734
chr6 31336870 rs2253907 C T 206474 Uterus 0.316336 8956711
chr6 31239585 rs1050437 C T 303759 Liver 0.127014 8955114
chr6 30727983 rs3095339 A G 815361 Lung 0.271949 8948559

Genomic Location chr6:31543344-31546113[+]
TSS 31543344
Gene Name TNF
Ensembl ID ENSG00000232810.3
ENTREZID 7124
Uniprot
Q5STB3
P01375
Protein Name
TNF
Tumor necrosis factor
Tumor necrosis factor alpha