EnhancerDB
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  3. vista1327[chr1:41961925-41962146]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1327[chr1:41961925-41962146]
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Tissue distribution of vista1327
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Transcription factor that possibly regulate vista1327[chr1:41961925-41962146]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41961219 41962182 CTCF UCSC Txn Factor no Conserved 107802954
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41961926 41961937 NFKB1 JASPAR yes 28395402
chr1 41961926 41961937 NFKB1 JASPAR yes 118278563
chr1 41961944 41961949 SP1 TRANSFAC yes 28395403
chr1 41961944 41961949 SP1 TRANSFAC yes 118278564
chr1 41961950 41961961 E2F1 JASPAR yes 28395404
chr1 41961950 41961961 E2F1 JASPAR yes 118278565
chr1 41961957 41961969 NHLH1 JASPAR yes 28395405
chr1 41961957 41961969 NHLH1 JASPAR yes 118278566
chr1 41961966 41961978 HINFP JASPAR yes 28395406
chr1 41961966 41961978 HINFP JASPAR yes 118278567
chr1 41961970 41961989 CTCF JASPAR yes 28395407
chr1 41961970 41961989 CTCF JASPAR yes 118278568
chr1 41961978 41961983 SP1 TRANSFAC yes 28395408
chr1 41961978 41961983 SP1 TRANSFAC yes 118278569
chr1 41961993 41962000 SP1 TRANSFAC yes 28395409
chr1 41961993 41962000 SP1 TRANSFAC yes 118278570
chr1 41961995 41962000 SP1 TRANSFAC yes 28395410
chr1 41961995 41962000 SP1 TRANSFAC yes 118278571
chr1 41962009 41962027 SRF JASPAR yes 28395411
chr1 41962009 41962027 SRF JASPAR yes 118278572
chr1 41962012 41962016 H1TF2 TRANSFAC yes 28395412
chr1 41962012 41962016 NFE TRANSFAC yes 28395413
chr1 41962012 41962016 SRF TRANSFAC yes 28395414
chr1 41962012 41962016 H1TF2 TRANSFAC yes 118278573
chr1 41962012 41962016 NFE TRANSFAC yes 118278574
chr1 41962012 41962016 SRF TRANSFAC yes 118278575
chr1 41962012 41962024 SRF JASPAR yes 28395415
chr1 41962012 41962024 SRF JASPAR yes 118278576
chr1 41962020 41962024 LFA1 TRANSFAC yes 28395416
chr1 41962020 41962024 LFA1 TRANSFAC yes 118278577
chr1 41962030 41962040 SP1 TRANSFAC yes 28395417
chr1 41962030 41962040 SP1 TRANSFAC yes 118278578
chr1 41962031 41962036 SP1 TRANSFAC yes 28395418
chr1 41962031 41962036 SP1 TRANSFAC yes 118278579
chr1 41962033 41962044 NRF1 JASPAR yes 28395419
chr1 41962033 41962044 NRF1 JASPAR yes 118278580
chr1 41962042 41962054 HES7 JASPAR yes 28395420
chr1 41962042 41962054 HES7 JASPAR yes 118278581
chr1 41962055 41962066 FOSL2 JASPAR yes 28395421
chr1 41962055 41962066 JUNB JASPAR yes 28395422
chr1 41962055 41962066 FOSL2 JASPAR yes 118278582
chr1 41962055 41962066 JUNB JASPAR yes 118278583
chr1 41962056 41962067 FOS JASPAR yes 28395423
chr1 41962056 41962067 FOSL1 JASPAR yes 28395424
chr1 41962056 41962067 JUND JASPAR yes 28395425
chr1 41962056 41962067 NFE2 JASPAR yes 28395426
chr1 41962056 41962067 FOS JASPAR yes 118278584
chr1 41962056 41962067 FOSL1 JASPAR yes 118278585
chr1 41962056 41962067 JUND JASPAR yes 118278586
chr1 41962056 41962067 NFE2 JASPAR yes 118278587
chr1 41962057 41962066 JDP2 JASPAR yes 28395427
chr1 41962057 41962066 JDP2 JASPAR yes 118278588
chr1 41962057 41962068 FOSL2 JASPAR yes 28395428
chr1 41962057 41962068 JUNB JASPAR yes 28395429
chr1 41962057 41962068 NFE2L2 JASPAR yes 28395430
chr1 41962057 41962068 FOSL2 JASPAR yes 118278589
chr1 41962057 41962068 JUNB JASPAR yes 118278590
chr1 41962057 41962068 NFE2L2 JASPAR yes 118278591
chr1 41962057 41962071 JUN JASPAR yes 28395431
chr1 41962057 41962071 JUN JASPAR yes 118278592
chr1 41962058 41962065 JUN TRANSFAC yes 28395432
chr1 41962058 41962065 JUN TRANSFAC yes 118278593
chr1 41962068 41962080 TEAD1 JASPAR yes 28395433
chr1 41962068 41962080 TEAD1 JASPAR yes 118278594
chr1 41962070 41962080 TEAD1 JASPAR yes 28395434
chr1 41962070 41962080 TEAD4 JASPAR yes 28395435
chr1 41962070 41962080 TEAD1 JASPAR yes 118278595
chr1 41962070 41962080 TEAD4 JASPAR yes 118278596
chr1 41962071 41962079 TEAD3 JASPAR yes 28395436
chr1 41962071 41962079 TEAD3 JASPAR yes 118278597
chr1 41962080 41962097 NR3C1 JASPAR yes 28395437
chr1 41962080 41962097 NR3C2 JASPAR yes 28395438
chr1 41962080 41962097 NR3C1 JASPAR yes 118278598
chr1 41962080 41962097 NR3C2 JASPAR yes 118278599
chr1 41962087 41962093 LEF1 TRANSFAC yes 28395439
chr1 41962087 41962093 SOX10 JASPAR yes 28395440
chr1 41962087 41962093 LEF1 TRANSFAC yes 118278600
chr1 41962087 41962093 SOX10 JASPAR yes 118278601
chr1 41962108 41962123 HSF1 JASPAR yes 28395441
chr1 41962108 41962123 HSF1 JASPAR yes 118278602
chr1 41962125 41962144 PAX5 JASPAR yes 28395442
chr1 41962125 41962144 PAX5 JASPAR yes 118278603
chr1 41962131 41962136 SP1 TRANSFAC yes 28395443
chr1 41962131 41962136 SP1 TRANSFAC yes 118278604
chr1 41962131 41962137 SP1 TRANSFAC yes 28395444
chr1 41962131 41962137 SP1 TRANSFAC yes 118278605
chr1 41962134 41962139 SP1 TRANSFAC yes 28395445
chr1 41962134 41962139 SP1 TRANSFAC yes 118278606
SNP sites on vista1327[chr1:41961925-41962146]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41961971 rs567050945 G T
CTCF HINFP TCF7L2
262301
chr1 41961974 rs139173359 C G,T
CTCF HINFP TCF7L2
262302
chr1 41961983 rs549152747 G T
CTCF SP1 TCF7L2
262303
chr1 41962029 rs747460 C G
CTCF TCF7L2
262304
chr1 41962068 rs578057500 G A
CTCF FOSL2 JUN JUNB NFE2L2 TCF7L2 TEAD1
262305
chr1 41962094 rs533930960 T A
CTCF NR3C1 NR3C2 TCF7L2
262306
Genes possibly regulated by vista1327[chr1:41961925-41962146]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 88419
Expression level of Genes
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miRNAs possibly regulated by vista1327[chr1:41961925-41962146]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.1131249545065498 0.790987 0.676023 1312
Expression level of miRNAs
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