EnhancerDB
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  3. rs139173359[chr1:41961974]
Enhancers that have rs139173359[chr1:41961974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41961925 41962146 vista1327
VISTA
Transcript factors that have rs139173359[chr1:41961974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41961219 41962182 CTCF UCSC Txn Factor no Conserved 107802954
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41961966 41961978 HINFP JASPAR yes 28395406
chr1 41961966 41961978 HINFP JASPAR yes 118278567
chr1 41961970 41961989 CTCF JASPAR yes 28395407
chr1 41961970 41961989 CTCF JASPAR yes 118278568
Genes associated with rs139173359[chr1:41961974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More