EnhancerDB
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  3. rs533930960[chr1:41962094]
Enhancers that have rs533930960[chr1:41962094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41961925 41962146 vista1327
VISTA
Transcript factors that have rs533930960[chr1:41962094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41961219 41962182 CTCF UCSC Txn Factor no Conserved 107802954
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41962080 41962097 NR3C1 JASPAR yes 28395437
chr1 41962080 41962097 NR3C2 JASPAR yes 28395438
chr1 41962080 41962097 NR3C1 JASPAR yes 118278598
chr1 41962080 41962097 NR3C2 JASPAR yes 118278599
Genes associated with rs533930960[chr1:41962094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More