EnhancerDB
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  3. rs578057500[chr1:41962068]
Enhancers that have rs578057500[chr1:41962068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41961925 41962146 vista1327
VISTA
Transcript factors that have rs578057500[chr1:41962068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41961219 41962182 CTCF UCSC Txn Factor no Conserved 107802954
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41962057 41962068 FOSL2 JASPAR yes 28395428
chr1 41962057 41962068 JUNB JASPAR yes 28395429
chr1 41962057 41962068 NFE2L2 JASPAR yes 28395430
chr1 41962057 41962068 FOSL2 JASPAR yes 118278589
chr1 41962057 41962068 JUNB JASPAR yes 118278590
chr1 41962057 41962068 NFE2L2 JASPAR yes 118278591
chr1 41962057 41962071 JUN JASPAR yes 28395431
chr1 41962057 41962071 JUN JASPAR yes 118278592
chr1 41962068 41962080 TEAD1 JASPAR yes 28395433
chr1 41962068 41962080 TEAD1 JASPAR yes 118278594
Genes associated with rs578057500[chr1:41962068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More