EnhancerDB
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  3. vista13567[chr12:54611719-54612027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13567[chr12:54611719-54612027]
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Tissue distribution of vista13567
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Transcription factor that possibly regulate vista13567[chr12:54611719-54612027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 54611658 54611932 POU2F2 UCSC Txn Factor no Conserved 108037117
chr12 54611716 54611719 MYB TRANSFAC yes 82411880
chr12 54611716 54611719 MYB TRANSFAC yes 121029495
chr12 54611720 54611736 E2F2 JASPAR yes 82411881
chr12 54611720 54611736 E2F2 JASPAR yes 121029496
chr12 54611729 54611739 SP1 JASPAR yes 82411882
chr12 54611729 54611739 SP1 JASPAR yes 121029497
chr12 54611730 54611740 SP1 JASPAR yes 82411883
chr12 54611730 54611740 SP1 JASPAR yes 121029498
chr12 54611739 54611753 RXRB JASPAR yes 82411884
chr12 54611739 54611753 RXRG JASPAR yes 82411885
chr12 54611739 54611753 RXRB JASPAR yes 121029499
chr12 54611739 54611753 RXRG JASPAR yes 121029500
chr12 54611774 54611778 LFA1 TRANSFAC yes 82411886
chr12 54611774 54611778 LFA1 TRANSFAC yes 121029501
chr12 54611782 54611795 POU2F2 JASPAR yes 82411887
chr12 54611782 54611795 POU2F2 JASPAR yes 121029502
chr12 54611782 54611796 POU1F1 JASPAR yes 82411888
chr12 54611782 54611796 POU1F1 JASPAR yes 121029503
chr12 54611783 54611795 POU3F1 JASPAR yes 82411889
chr12 54611783 54611795 POU3F2 JASPAR yes 82411890
chr12 54611783 54611795 POU3F1 JASPAR yes 121029504
chr12 54611783 54611795 POU3F2 JASPAR yes 121029505
chr12 54611783 54611796 POU3F3 JASPAR yes 82411891
chr12 54611783 54611796 POU3F3 JASPAR yes 121029506
chr12 54611784 54611796 POU2F1 JASPAR yes 82411892
chr12 54611784 54611796 POU2F1 JASPAR yes 121029507
chr12 54611785 54611792 POU2F1 TRANSFAC yes 82411893
chr12 54611785 54611792 POU2F2C TRANSFAC yes 82411894
chr12 54611785 54611792 POU2F2 TRANSFAC yes 82411895
chr12 54611785 54611792 POU2F1 TRANSFAC yes 121029508
chr12 54611785 54611792 POU2F2C TRANSFAC yes 121029509
chr12 54611785 54611792 POU2F2 TRANSFAC yes 121029510
chr12 54611785 54611793 POU2F1 TRANSFAC yes 82411896
chr12 54611785 54611793 POU2F1 TRANSFAC yes 121029511
chr12 54611785 54611794 POU3F4 JASPAR yes 82411897
chr12 54611785 54611794 POU5F1B JASPAR yes 82411898
chr12 54611785 54611794 POU3F4 JASPAR yes 121029512
chr12 54611785 54611794 POU5F1B JASPAR yes 121029513
chr12 54611792 54611805 POU2F2 JASPAR yes 82411899
chr12 54611792 54611805 POU2F2 JASPAR yes 121029514
chr12 54611792 54611806 POU1F1 JASPAR yes 82411900
chr12 54611792 54611806 POU1F1 JASPAR yes 121029515
chr12 54611793 54611805 POU3F1 JASPAR yes 82411901
chr12 54611793 54611805 POU3F2 JASPAR yes 82411902
chr12 54611793 54611805 POU3F1 JASPAR yes 121029516
chr12 54611793 54611805 POU3F2 JASPAR yes 121029517
chr12 54611793 54611806 POU3F3 JASPAR yes 82411903
chr12 54611793 54611806 POU3F3 JASPAR yes 121029518
chr12 54611794 54611798 YY1 TRANSFAC yes 82411904
chr12 54611794 54611798 YY1 TRANSFAC yes 121029519
chr12 54611794 54611806 POU2F1 JASPAR yes 82411905
chr12 54611794 54611806 POU2F1 JASPAR yes 121029520
chr12 54611795 54611802 POU2F1 TRANSFAC yes 82411906
chr12 54611795 54611802 POU2F2C TRANSFAC yes 82411907
chr12 54611795 54611802 POU2F2 TRANSFAC yes 82411908
chr12 54611795 54611802 POU2F1 TRANSFAC yes 121029521
chr12 54611795 54611802 POU2F2C TRANSFAC yes 121029522
chr12 54611795 54611802 POU2F2 TRANSFAC yes 121029523
chr12 54611795 54611803 POU2F1 TRANSFAC yes 82411909
chr12 54611795 54611803 POU2F1 TRANSFAC yes 121029524
chr12 54611795 54611804 POU3F4 JASPAR yes 82411910
chr12 54611795 54611804 POU5F1B JASPAR yes 82411911
chr12 54611795 54611804 POU3F4 JASPAR yes 121029525
chr12 54611795 54611804 POU5F1B JASPAR yes 121029526
chr12 54611803 54611815 NHLH1 JASPAR yes 82411912
chr12 54611803 54611815 NHLH1 JASPAR yes 121029527
chr12 54611804 54611814 NHLH1 JASPAR yes 82411913
chr12 54611804 54611814 NHLH1 JASPAR yes 121029528
chr12 54611813 54611825 NHLH1 JASPAR yes 82411914
chr12 54611813 54611825 NHLH1 JASPAR yes 121029529
chr12 54611813 54611826 ZBTB18 JASPAR yes 82411915
chr12 54611813 54611826 ZBTB18 JASPAR yes 121029530
chr12 54611814 54611824 NHLH1 JASPAR yes 82411916
chr12 54611814 54611824 NHLH1 JASPAR yes 121029531
chr12 54611825 54611839 TLX1 JASPAR yes 82411917
chr12 54611825 54611839 TLX1 JASPAR yes 121029532
chr12 54611833 54611844 CDX2 JASPAR yes 82411918
chr12 54611833 54611844 CDX2 JASPAR yes 121029533
chr12 54611834 54611845 HOXA10 JASPAR yes 82411919
chr12 54611834 54611845 HOXA10 JASPAR yes 121029534
chr12 54611835 54611844 CDX1 JASPAR yes 82411920
chr12 54611835 54611844 CDX1 JASPAR yes 121029535
chr12 54611859 54611879 PPARG JASPAR yes 82411921
chr12 54611859 54611879 PPARG JASPAR yes 121029536
chr12 54611870 54611884 GLIS2 JASPAR yes 82411922
chr12 54611870 54611884 ZIC1 JASPAR yes 82411923
chr12 54611870 54611884 GLIS2 JASPAR yes 121029537
chr12 54611870 54611884 ZIC1 JASPAR yes 121029538
chr12 54611870 54611885 ZIC4 JASPAR yes 82411924
chr12 54611870 54611885 ZIC4 JASPAR yes 121029539
chr12 54611880 54611891 NRF1 JASPAR yes 82411925
chr12 54611880 54611891 NRF1 JASPAR yes 121029540
chr12 54611881 54611885 LFA1 TRANSFAC yes 82411926
chr12 54611881 54611885 LFA1 TRANSFAC yes 121029541
chr12 54611899 54611910 NRF1 JASPAR yes 82411927
chr12 54611899 54611910 NRF1 JASPAR yes 121029542
chr12 54611951 54611963 HNF1B JASPAR yes 82411928
chr12 54611951 54611963 HNF1B JASPAR yes 121029543
chr12 54611955 54611961 JUN TRANSFAC yes 82411929
chr12 54611955 54611961 JUN TRANSFAC yes 121029544
chr12 54611959 54611962 MYB TRANSFAC yes 82411930
chr12 54611959 54611962 MYB TRANSFAC yes 121029545
chr12 54611976 54611985 THAP1 JASPAR yes 82411931
chr12 54611976 54611985 THAP1 JASPAR yes 121029546
chr12 54612000 54612019 CTCF JASPAR yes 82411932
chr12 54612000 54612019 CTCF JASPAR yes 121029547
chr12 54612014 54612018 LFA1 TRANSFAC yes 82411933
chr12 54612014 54612018 LFA1 TRANSFAC yes 121029548
chr12 54612018 54612031 SMAD2 JASPAR yes 82411934
chr12 54612018 54612031 SMAD2 JASPAR yes 121029549
chr12 54612022 54612026 NFE TRANSFAC yes 82411935
chr12 54612022 54612026 NFE TRANSFAC yes 121029550
chr12 54612022 54612035 SMAD2 JASPAR yes 82411936
chr12 54612022 54612035 SMAD2 JASPAR yes 121029551
SNP sites on vista13567[chr12:54611719-54612027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 54611795 rs528945151 C T
POU1F1 POU2F1 POU2F2 POU2F2C POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B YY1
2651225
chr12 54611827 rs549393000 C G
POU2F2 TLX1
2651226
chr12 54611890 rs548454645 G C
NRF1 POU2F2
2651227
chr12 54611925 rs11614841 T C
POU2F2
2651228
chr12 54611954 rs138178802 C T
HNF1B
2651229
chr12 54611984 rs552359429 G C
THAP1
2651230
Genes possibly regulated by vista13567[chr12:54611719-54612027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 54558529 54582778 - SMUG1 ENSG00000123415.10 54582778 0.63 0.99 12144 71059
chr12 54624724 54673886 - CBX5 ENSG00000094916.9 54673886 0.79 0.98 12145 38141
chr12 54673977 54680872 + HNRNPA1 ENSG00000135486.13 54673977 0.83 0.98 12146 38050
chr12 54685895 54694905 - NFE2 ENSG00000123405.9 54694905 0.97 0.95 12147 17122
chr12 54694986 54745633 + COPZ1 ENSG00000111481.5 54694986 0.64 1.0 12148 17041
Expression level of Genes
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miRNAs possibly regulated by vista13567[chr12:54611719-54612027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results